Protein Alignment Ssrp and ssrp1b

DIOPT Version :10

• Sequence 1: NP_523830.2
• Gene: Ssrp / 37767
• FlyBaseID: FBgn0010278
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: XP_001923156.3
• Gene: ssrp1b / 449949
• ZFINID: ZDB-GENE-041008-209
• Length: 703
• Species: Danio rerio
• Alignment Length: 728
• Identity: 366/728 - (50%)
• Similarity: 502/728 - (68%)
• Gaps: 42/728 - (5%)

  Fly     1 MTDSLEYNDINAEVRGVLCSGRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVF 65
            |:|:||:|:|..||:|....|||:.::|.:::||:|||||:.|...::.....::.....|::::
Zfish     1 MSDTLEFNEIYQEVKGSWNDGRLRFSKQTVVYKNSKTGKVDTIPVPELTQAQWRRVCLGHGIKLW 65

  Fly    66 TKGGVLHRFTGFRDSEHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFE 130
            |..|.::::.||:|::.||:.::.|..|..|:.||:|||||||||||:|.|.:||||......||
Zfish    66 TSTGHIYKYDGFKDADLEKISEYFKDNYKVELTEKDMCVKGWNWGTAKFNGPLLSFDVNDSPTFE 130

  Fly   131 VPLSHVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESAE-EDPVDKFHQNVMSKASVISA 194
            :|||.||||.|||||||:|||||||..|.|:|:||::|.....| .|||:.|.|||:|||.||.|
Zfish   131 IPLSSVSQCTTGKNEVTVEFHQNDDTEVSLMEVRFYVPPTTGDEGSDPVEAFAQNVLSKADVIQA 195

  Fly   195 SGESIAIFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSL 259
            :|:::.||||:|.|||||||||:|:.||..|||||||||||..:|||||:|||||.||||||:||
Zfish   196 TGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISL 260

  Fly   260 DPPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGR 324
            ||||||||||||:|:|||:.:|..::.|..:|.|:..::||||.|.:||.:||::.:|||.|:.|
Zfish   261 DPPIKQGQTRYHFLILLFSKEETISLTLNMNEDEVERRFEGKLNKNMSGSLYEMVSRVMKALVNR 325

  Fly   325 KITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFARSGGSTRSF 389
            |||.||||.||||...:.||:||::|.||||||||||:||||:|:|||||:.|||||...:||||
Zfish   326 KITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVHLRFEEIACVNFARGTTTTRSF 390

  Fly   390 DFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVD--FGDSDNENEPDAY 452
            |||:..|.|..:.|||||:|||.||||::..|||.:.|.| .|.|.|..|  :.||| |::.|||
Zfish   391 DFEIETKQGNQYTFSSIEREEYGKLFDFVNAKKLSIKNRG-FKEGMKGNDDMYSDSD-EDQHDAY 453

  Fly   453 LARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSNVESDSDDDSDASGGGGDSDG 517
            |.|:|.|.:.:||.:|..||:.|| ||.|.|.|.:.|:||||||...:     |::|...||||
Zfish   454 LERMKEEGKIREEGNDSDDSEGES-DESFNPGEEDEDIAEEYDSKASA-----SESSAEEGDSD- 511

  Fly   518 AKKKKEKKSEKKEK--KEKKHKEKERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGI 580
              :.::|||.||.|  ||:|.::||      ||.||||.|||..:|:|||||.:|:.||.|||||
Zfish   512 --EDRKKKSAKKVKFVKERKPRKKE------KKVKDSGAPKRPMSAYMLWLNSSRDRIKSENPGI 568

  Fly   581 KVTEIAKKGGEMWKEL-KD-KSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDN------EKGGKSS 637
            .:|||:||.|||||:| || |.:|:..|.:.|:.|...||.|:...||.|.:      :|.|::.
Zfish   569 SITEISKKAGEMWKQLGKDKKEEWDGKAEEAKKEYDRAMREYRESGGGSSGSSKKERKKKRGRNE 633

  Fly   638 KKRKTEP----SPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKKKAK 698
            :|||.:.    ...|:.:|....|||:|:||.::|:|..|:     .||:.:..||.:   |:.:
Zfish   634 EKRKRKSGAGREKEKERSTGNDSFKSREFISSEESSSESDK-----GKKRKRKGSDNE---KEEE 690

  Fly   699 SESEPEESEEDSN 711
            :.|.|..||..|:
Zfish   691 AVSTPASSESGSD 703

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ssrp	NP_523830.2	POB3	20..499	CDD:227494	267/481 (56%)
		HMG-box_SSRP1-like	557..621	CDD:438810	35/65 (54%)
ssrp1b	XP_001923156.3	POB3	21..514	CDD:227494	273/503 (54%)
		HMG-box_SSRP1-like	545..611	CDD:438810	35/65 (54%)