powered by:
Protein Alignment Ssrp and hmg20a
DIOPT Version :9
Sequence 1: | NP_523830.2 |
Gene: | Ssrp / 37767 |
FlyBaseID: | FBgn0010278 |
Length: | 723 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001006760.1 |
Gene: | hmg20a / 448440 |
XenbaseID: | XB-GENE-955353 |
Length: | 345 |
Species: | Xenopus tropicalis |
Alignment Length: | 191 |
Identity: | 45/191 - (23%) |
Similarity: | 84/191 - (43%) |
Gaps: | 21/191 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 456 LKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSNVESDSDDDSDASGGGGDSDGAKK 520
|..:.:|..|....|.|...|:...|.| ::.:...:|.|..:...|.:....:.|
Frog 15 LVVDTKENAEPPFCGISLSGSSQAPFHP-QSPTLQQDERDELILQQSGEQQLGNSG--------- 69
Fly 521 KKEKKSEKKEKKEKK---HKEKERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKV 582
|.:.|::..|.:: .|.::|.:.| :|:..||...|.::.::|:.||.::.|.|.:..
Frog 70 --ELRQEEELPKTRRGGWTKGRKRKRSP----RDNNAPKAPLTGYVRFMNERREQLRTERPDVPF 128
Fly 583 TEIAKKGGEMWKEL--KDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK 641
.||.:..|..|.:| .:|..:.|.|.|||:||..|::.|:......:.:.|.....|.|:
Frog 129 PEITRIVGSEWSKLPAHEKQHYLDEAEKDKERYTKELQQYQNTDAYQTYSRKAQSRQKGRQ 189
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
Return to query results.
Submit another query.