DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Ssrp and hmg20a

DIOPT Version :9

Sequence 1:	NP_523830.2	Gene:	Ssrp / 37767	FlyBaseID:	FBgn0010278	Length:	723	Species:	Drosophila melanogaster
Sequence 2:	NP_001006760.1	Gene:	hmg20a / 448440	XenbaseID:	XB-GENE-955353	Length:	345	Species:	Xenopus tropicalis

Alignment Length:	191	Identity:	45/191 - (23%)
Similarity:	84/191 - (43%)	Gaps:	21/191 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly   456 LKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSNVESDSDDDSDASGGGGDSDGAKK 520
            |..:.:|..|....|.|...|:...|.| ::.:...:|.|..:...|.:....:.|
Frog    15 LVVDTKENAEPPFCGISLSGSSQAPFHP-QSPTLQQDERDELILQQSGEQQLGNSG--------- 69

  Fly   521 KKEKKSEKKEKKEKK---HKEKERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKV 582
              |.:.|::..|.::   .|.::|.:.|    :|:..||...|.::.::|:.||.::.|.|.:..
Frog    70 --ELRQEEELPKTRRGGWTKGRKRKRSP----RDNNAPKAPLTGYVRFMNERREQLRTERPDVPF 128

  Fly   583 TEIAKKGGEMWKEL--KDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK 641
            .||.:..|..|.:|  .:|..:.|.|.|||:||..|::.|:......:.:.|.....|.|:
Frog   129 PEITRIVGSEWSKLPAHEKQHYLDEAEKDKERYTKELQQYQNTDAYQTYSRKAQSRQKGRQ 189

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ssrp	NP_523830.2	POB3	20..499	CDD:227494	10/42 (24%)
		SSrecog	75..284	CDD:281523
		PH2_SSRP1-like	332..427	CDD:270051
		HMG_box	557..620	CDD:278906	20/64 (31%)
hmg20a	NP_001006760.1	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	1..124		26/124 (21%)
		NHP6B	48..>181	CDD:227935	34/147 (23%)
		HMGB-UBF_HMG-box	101..166	CDD:238686	22/64 (34%)
		SMC_prok_A	<141..322	CDD:274009	14/49 (29%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	167..198		4/23 (17%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910