DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Ssrp and hmgb3

DIOPT Version :9

Sequence 1:	NP_523830.2	Gene:	Ssrp / 37767	FlyBaseID:	FBgn0010278	Length:	723	Species:	Drosophila melanogaster
Sequence 2:	NP_001004888.1	Gene:	hmgb3 / 448228	XenbaseID:	XB-GENE-1002014	Length:	202	Species:	Xenopus tropicalis

Alignment Length:	164	Identity:	53/164 - (32%)
Similarity:	78/164 - (47%)	Gaps:	26/164 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly   521 KKEKKSEKKEKKEKKHKEKERTK----KPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIK 581
            |::.|.:...|.:|...::|...    |..|||||...|||..:.|.|:.::.|..||..||||.
Frog    55 KEKSKFDDLAKADKVRYDREMKDFGPVKKGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS 119

  Fly   582 VTEIAKKGGEMWKELKD--KSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRKTEP 644
            :.::|||.||||..|.|  |..:.:.|||.|::|..::.:||.:  |..|..||.....::|.|.
Frog   120 IGDVAKKLGEMWNNLNDGEKQPYNNKAAKLKEKYEKDVADYKSK--GKFDCAKGAPKLARKKEED 182

  Fly   645 SPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNE 678
            .                  .|||....:||:|.|
Frog   183 E------------------DDDDEDEEEDEEDEE 198

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ssrp	NP_523830.2	POB3	20..499	CDD:227494
		SSrecog	75..284	CDD:281523
		PH2_SSRP1-like	332..427	CDD:270051
		HMG_box	557..620	CDD:278906	25/64 (39%)
hmgb3	NP_001004888.1	HMG-box	13..78	CDD:381793	5/22 (23%)
hmgb3	NP_001004888.1	HMG_box	93..160	CDD:366139	27/66 (41%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910