Protein Alignment Ssrp and ssrp1

DIOPT Version :10

• Sequence 1: NP_523830.2
• Gene: Ssrp / 37767
• FlyBaseID: FBgn0010278
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_001184126.1
• Gene: ssrp1 / 447983
• XenbaseID: XB-GENE-994294
• Length: 695
• Species: Xenopus tropicalis
• Alignment Length: 713
• Identity: 369/713 - (51%)
• Similarity: 490/713 - (68%)
• Gaps: 42/713 - (5%)

  Fly     1 MTDSLEYNDINAEVRGVLCSGRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVF 65
            |.|:||:|||..||:|.:..|||:::...:::||.||||||.|||.||..:..::.....|:::.
 Frog     1 MADTLEFNDIYQEVKGSMNDGRLRLSRAGLMYKNNKTGKVENISAADIAEVVWRRVALGHGIKLL 65

  Fly    66 TKGGVLHRFTGFRDSEHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFE 130
            |.||.::::.||||:|::||..:.|:.:..|:|||::||||||||:.||.|.:||||...:..||
 Frog    66 TNGGHVYKYDGFRDTEYDKLFDYFKSHFRVELVEKDLCVKGWNWGSVRFGGQLLSFDIGDQPAFE 130

  Fly   131 VPLSHVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESAEEDPVDKFHQNVMSKASVISAS 195
            :|||:||||.|||||||||||||||:.|.|:|:||::|..:....|||:.|.|||:|||.||.|:
 Frog   131 LPLSNVSQCTTGKNEVTLEFHQNDDSEVSLMEIRFYVPPTQDDGGDPVEAFAQNVLSKADVIQAT 195

  Fly   196 GESIAIFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 260
            |:::.||||:|.|||||||||:|:.||..|||||||||||..:|||||:|||||.||||||:|||
 Frog   196 GDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLD 260

  Fly   261 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRK 325
            |||||||||||:|:|||:.||:.|:.|..||.|:..::||||:|.:||.:||::.:|||.|:.||
 Frog   261 PPIKQGQTRYHFLILLFSKDEDMTLTLNMSEEEVERRFEGKLKKNMSGCLYEMVSRVMKALVNRK 325

  Fly   326 ITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFARSGGSTRSFD 390
            ||.||||.||||:..:.||:||::|.||||||||||:||||:||||:|::.|||||...:|||||
 Frog   326 ITVPGNFQGHSGSQCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDEVNCVNFARGTTTTRSFD 390

  Fly   391 FEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDV--DFGDSDNENEPDAYL 453
            ||:..|.|:.:.|||||:|||.||||::..|||.:.|.|. |.|.|..  |:.||| |::.||||
 Frog   391 FEIETKQGSQYTFSSIEREEYGKLFDFVNAKKLSIKNRGL-KEGMKPAYDDYADSD-EDQHDAYL 453

  Fly   454 ARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSNVE-SDSDDDSDASGGGGDSDG 517
            .|:|.|.:.:|..|.|...||  |||.|.|.|.|.:||||:|||.. |.|..|||        |.
 Frog   454 ERMKEEGKIRENADSDESGDE--TDESFNPGEEEDEVAEEFDSNPSASSSSADSD--------DD 508

  Fly   518 AKKKKEKKSEK--KEKKEKKHKEKERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGI 580
            |:||||.|..|  ||||.:|       ||.|||.||...|||..:|:|||||.:||.||.|||||
 Frog   509 AEKKKEAKRAKIVKEKKPRK-------KKESKKTKDPSAPKRPMSAYMLWLNASREKIKSENPGI 566

  Fly   581 KVTEIAKKGGEMWKEL-KD-KSKWEDAAAKDKQRYHDEMRNYKPEAGGD-SDNEKGGKSSKKRKT 642
            .:|:::||.||:||.: || |.:|:..|.:.|:.|...|:.|......: |..||..|..||:|.
 Frog   567 SITDLSKKAGEIWKSMSKDKKEEWDRRAEEAKRDYEKAMKEYNSSTPTEASKKEKKAKGEKKKKA 631

  Fly   643 EPSPSK-------------KANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDA 692
            |.|..|             |:||  ..|||||::|.|:|:|.|..:..:..:..|.|.|..::
 Frog   632 ESSEKKKHVKASSPARAALKSNT--DSFKSKEFVSSDESSSDDSIQKKDSEEIASTPDSSAES 692

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ssrp	NP_523830.2	POB3	20..499	CDD:227494	274/480 (57%)
		HMG-box_SSRP1-like	557..621	CDD:438810	31/65 (48%)
ssrp1	NP_001184126.1	POB3	21..471	CDD:227494	258/451 (57%)
		HMG-box_SSRP1-like	543..609	CDD:438810	31/65 (48%)