Sequence 1: | NP_523830.2 | Gene: | Ssrp / 37767 | FlyBaseID: | FBgn0010278 | Length: | 723 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001184126.1 | Gene: | ssrp1 / 447983 | XenbaseID: | XB-GENE-994294 | Length: | 695 | Species: | Xenopus tropicalis |
Alignment Length: | 713 | Identity: | 369/713 - (51%) |
---|---|---|---|
Similarity: | 490/713 - (68%) | Gaps: | 42/713 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MTDSLEYNDINAEVRGVLCSGRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVF 65
Fly 66 TKGGVLHRFTGFRDSEHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFE 130
Fly 131 VPLSHVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESAEEDPVDKFHQNVMSKASVISAS 195
Fly 196 GESIAIFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 260
Fly 261 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRK 325
Fly 326 ITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFARSGGSTRSFD 390
Fly 391 FEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDV--DFGDSDNENEPDAYL 453
Fly 454 ARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSNVE-SDSDDDSDASGGGGDSDG 517
Fly 518 AKKKKEKKSEK--KEKKEKKHKEKERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGI 580
Fly 581 KVTEIAKKGGEMWKEL-KD-KSKWEDAAAKDKQRYHDEMRNYKPEAGGD-SDNEKGGKSSKKRKT 642
Fly 643 EPSPSK-------------KANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDA 692 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ssrp | NP_523830.2 | POB3 | 20..499 | CDD:227494 | 274/480 (57%) |
SSrecog | 75..284 | CDD:281523 | 135/208 (65%) | ||
PH2_SSRP1-like | 332..427 | CDD:270051 | 58/94 (62%) | ||
HMG_box | 557..620 | CDD:278906 | 31/64 (48%) | ||
ssrp1 | NP_001184126.1 | POB3 | 21..471 | CDD:227494 | 258/451 (57%) |
HMG_box | 541..608 | CDD:366139 | 33/66 (50%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 233 | 1.000 | Domainoid score | I2338 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H110735 | |
Inparanoid | 1 | 1.050 | 711 | 1.000 | Inparanoid score | I635 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D244836at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003358 | |
OrthoInspector | 1 | 1.000 | - | - | oto105059 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR45849 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2245 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 9.160 |