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Protein Alignment Ssrp and HmgD
DIOPT Version :9
Sequence 1: | NP_523830.2 |
Gene: | Ssrp / 37767 |
FlyBaseID: | FBgn0010278 |
Length: | 723 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001163244.1 |
Gene: | HmgD / 37481 |
FlyBaseID: | FBgn0004362 |
Length: | 112 |
Species: | Drosophila melanogaster |
Alignment Length: | 125 |
Identity: | 63/125 - (50%) |
Similarity: | 80/125 - (64%) |
Gaps: | 14/125 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 552 SGKPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDE 616
|.||||..:|:|||||..|||||||||||||||:||:|||:|:.:||||:||..|||.|..|...
Fly 2 SDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRA 66
Fly 617 MRNYKPEAGGDSDNEKGGKSSKKRKTEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKD 676
::.: ||.|.|....||.:.|:.| |:||. ..|||:..||:| .|||.:
Fly 67 VKEF--EANGGSSAANGGGAKKRAK----PAKKV-----AKKSKKEESDED---DDDESE 112
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45449364 |
Domainoid |
1 |
1.000 |
57 |
1.000 |
Domainoid score |
I3986 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.840 |
|
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