Protein Alignment Ssrp and HmgZ

DIOPT Version :9

• Sequence 1: NP_523830.2
• Gene: Ssrp / 37767
• FlyBaseID: FBgn0010278
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_001286694.1
• Gene: HmgZ / 37480
• FlyBaseID: FBgn0010228
• Length: 111
• Species: Drosophila melanogaster
• Alignment Length: 125
• Identity: 55/125 - (44%)
• Similarity: 80/125 - (64%)
• Gaps: 20/125 - (16%)

  Fly   554 KPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMR 618
            :|||..:|:|||||:|||.||::|||.|||:|||:|||:|:.||||::||..|.|.|:.|:..::
  Fly     5 RPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKDKTEWEQKAIKMKEEYNKAVK 69

  Fly   619 NYKPEAGGDSDNEKGGKSSKKRKTEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNE 678
            .|:...|.||     |...|::|....|:|||       |.||        ||::|:::|
  Fly    70 EYEANGGTDS-----GAPKKRKKAAAKPAKKA-------KKKE--------SSEEEEEDE 109

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ssrp	NP_523830.2	POB3	20..499	CDD:227494
		SSrecog	75..284	CDD:281523
		PH2_SSRP1-like	332..427	CDD:270051
		HMG_box	557..620	CDD:278906	35/62 (56%)
HmgZ	NP_001286694.1	HMG_box	6..71	CDD:395407	37/64 (58%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45449365
Domainoid	1	1.000	57	1.000	Domainoid score	I3986
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.840