DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Ssrp and Bap111

DIOPT Version :9

Sequence 1:	NP_523830.2	Gene:	Ssrp / 37767	FlyBaseID:	FBgn0010278	Length:	723	Species:	Drosophila melanogaster
Sequence 2:	NP_572530.1	Gene:	Bap111 / 31846	FlyBaseID:	FBgn0030093	Length:	749	Species:	Drosophila melanogaster

Alignment Length:	199	Identity:	47/199 - (23%)
Similarity:	73/199 - (36%)	Gaps:	62/199 - (31%)

- Green bases have known domain annotations that are detailed below.

  Fly   506 SDASGGGGDSDGAK------------------KKKEKKSEKKEKKEKKHKEKERTKKPSKKKKDS 552
            |.:|||||..|..|                  :|..|.|..|.:.|      .|..||.|
  Fly    34 SRSSGGGGGGDRNKDQTPIFTHSNYGNPAFTPQKVTKSSSSKNQNE------SRLPKPPK----- 87

  Fly   553 GKPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKELKDKSKWE--DAAAKDKQRYHD 615
             .|::....:|.:.....:|:|.::|.:|:.|:.||.|.|||.|.:..|.|  |....:|..|..
  Fly    88 -PPEKPILPYMRYSKRVWDSVKAKHPELKLWELGKKIGAMWKLLPEDEKTEFIDEYEAEKLEYEK 151

  Fly   616 EMRNY------------------------KPEAGGDSDNEKGGKSSKKRKTEPSPSKKANTSGSG 656
            .::.|                        .|..||      |.||..:|:.:..|::..:....|
  Fly   152 SLKAYHQTPAYQAYMSAKSKVKTDVDMHETPSRGG------GSKSQHERRIDIQPAEDEDDQDEG 210

  Fly   657 FKSK 660
            :.:|
  Fly   211 YTTK 214

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ssrp	NP_523830.2	POB3	20..499	CDD:227494
		SSrecog	75..284	CDD:281523
		PH2_SSRP1-like	332..427	CDD:270051
		HMG_box	557..620	CDD:278906	18/64 (28%)
Bap111	NP_572530.1	HMGB-UBF_HMG-box	95..154	CDD:238686	18/58 (31%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45450764
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930