Protein Alignment Ssrp and hmg-1.1

DIOPT Version :9

• Sequence 1: NP_523830.2
• Gene: Ssrp / 37767
• FlyBaseID: FBgn0010278
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_001370073.1
• Gene: hmg-1.1 / 175081
• WormBaseID: WBGene00001971
• Length: 95
• Species: Caenorhabditis elegans
• Alignment Length: 88
• Identity: 41/88 - (46%)
• Similarity: 54/88 - (61%)
• Gaps: 3/88 - (3%)

  Fly   534 KKHKEKERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKELKD 598
            ||....:|.|| ..|.||...||||.:||..|:.:.||.||:  ||:.|.::||..|..|.:|.|
 Worm     8 KKASPVKRVKK-GGKAKDPNAPKRAMSAFFFWMQENRERIKK--PGMGVADVAKAAGVEWGKLTD 69

  Fly   599 KSKWEDAAAKDKQRYHDEMRNYK 621
            ||:||..||.||:||..::.|||
 Worm    70 KSRWEKKAADDKKRYEVDIANYK 92

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ssrp	NP_523830.2	POB3	20..499	CDD:227494
		SSrecog	75..284	CDD:281523
		PH2_SSRP1-like	332..427	CDD:270051
		HMG_box	557..620	CDD:278906	28/62 (45%)
hmg-1.1	NP_001370073.1	HMGB-UBF_HMG-box	28..89	CDD:238686	30/62 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	72	1.000	Domainoid score	I6068
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910