Protein Alignment Ssrp and Ssrp

DIOPT Version :10

• Sequence 1: NP_523830.2
• Gene: Ssrp / 37767
• FlyBaseID: FBgn0010278
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: XP_320213.4
• Gene: Ssrp / 1280366
• VectorBaseID: AGAMI1_014024
• Length: 728
• Species: Anopheles gambiae
• Alignment Length: 740
• Identity: 473/740 - (63%)
• Similarity: 575/740 - (77%)
• Gaps: 39/740 - (5%)

  Fly     1 MTDSLEYNDINAEVRGVLCSGRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVF 65
            |.|.|||:.|::|:||.:|.|:||||:..::||:.||||||||::.||:|:|.|:|||::|||||
Mosquito     1 MADFLEYSSISSEIRGAMCPGKLKMTDTAMVFKSDKTGKVEQINSSDIELLNYQRFVGSFGLRVF 65

  Fly    66 TKGGVLHRFTGFRDSEHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFE 130
            .|.|.||||.||...| .|:.:|:|..|..:|:|||:.::|||||:.:|.|:|||||.|:||.||
Mosquito    66 LKNGSLHRFLGFTGDE-AKIAEFVKKNYKLDMLEKELSMRGWNWGSVQFKGAVLSFDVENKTSFE 129

  Fly   131 VPLSHVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESA-EEDPVDKFHQNVMSKASVISA 194
            :||:|||||..||||||:|||:||||||.|:|||||||..||| :.|||:.|.:|||.:|||||.
Mosquito   130 IPLNHVSQCNVGKNEVTVEFHRNDDAPVSLMEMRFHIPTSESAGDVDPVEAFQENVMKQASVISV 194

  Fly   195 SGESIAIFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSL 259
            ||::|||||||..||||||||||:|.:||||||||:|:|||..||||||:|||||:||||||:||
Mosquito   195 SGDAIAIFREIHCLTPRGRYDIKVFQSFFQLHGKTYDFKIPTSSVLRLFLLPHKDNRQMFFVISL 259

  Fly   260 DPPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGR 324
            ||||||||||||:||.||..||||.|||||:|.||::|||.||.||:|||||||:||:|||:|.|
Mosquito   260 DPPIKQGQTRYHFLVTLFQMDEETNIELPFTEEELKEKYEDKLTKELSGPVYEVLGKIMKVIINR 324

  Fly   325 KITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFARSGGSTRSF 389
            |:||||.|||||||.|:||||||||||||||||||||:||||:||||||||:|||||||||||||
Mosquito   325 KLTGPGTFIGHSGTPAIGCSFKAAAGYLYPLERGFIYVHKPPVHIRFEEISTVNFARSGGSTRSF 389

  Fly   390 DFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLA 454
            |||:.||.||||.|||||||||:||||:|..|||:|.|.| .|:.||| ||.|||||.|||||||
Mosquito   390 DFEIELKTGTVHTFSSIEKEEYSKLFDFIVSKKLNVKNTG-GKASYKD-DFADSDNEGEPDAYLA 452

  Fly   455 RLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSNVESDSDDDSDASGGGGDSD--- 516
            |:||||:|::||||..|| ||||||||.||:.|||||||:||||||.|||..|..|.|||||
Mosquito   453 RVKAEAKERDEDDDGSDS-EESTDEDFNPNQQESDVAEEFDSNVESSSDDSDDEDGSGGDSDDGS 516

  Fly   517 ----GAKKKKEKKSEKKE---------KKEKKHKEKERTKKPSKKKKDSGKPKRATTAFMLWLND 568
                |.:||::||.||||         |||||.|::.:.|| |||.||...|||.:|||||::|.
Mosquito   517 GSDGGREKKRDKKKEKKEKVKEKAPKPKKEKKEKKEPKAKK-SKKSKDPNAPKRPSTAFMLFMNA 580

  Fly   569 TRESIKRENPGIKVTEIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKG 633
            :||.||::.||:.:||::|||||:|||||||.:||..|||.|..|.:.|..:|...||....:||
Mosquito   581 SREQIKKDFPGLSITEMSKKGGELWKELKDKKEWEAKAAKAKDDYTEAMAAWKASGGGTDGGDKG 645

  Fly   634 GKSSKKRKTEPSPSKKANTS---GSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKK 695
            .|..|      |.:||::.|   ||||||||:|..|||:|.:|.|.:   .||||.....|.|||
Mosquito   646 EKRKK------STAKKSSDSAMKGSGFKSKEFIEGDDSSSDEDTKKD---TKKSKATESTDKKKK 701

  Fly   696 KAKSESEPEESEEDSNASDEDEEDE 720
            ..||:||.|.|     ||:|:||||
Mosquito   702 SKKSDSESEMS-----ASEEEEEDE 721

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ssrp	NP_523830.2	POB3	20..499	CDD:227494	344/479 (72%)
		HMG-box_SSRP1-like	557..621	CDD:438810	35/63 (56%)
Ssrp	XP_320213.4	POB3	20..494	CDD:227494	340/474 (72%)
		HMG-box_SSRP1-like	569..633	CDD:438810	31/63 (49%)