Protein Alignment Ssrp and Dsp1

DIOPT Version :9

• Sequence 1: NP_523830.2
• Gene: Ssrp / 37767
• FlyBaseID: FBgn0010278
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_001138203.1
• Gene: Dsp1 / 117294
• FlyBaseID: FBgn0278608
• Length: 397
• Species: Drosophila melanogaster
• Alignment Length: 289
• Identity: 63/289 - (21%)
• Similarity: 105/289 - (36%)
• Gaps: 74/289 - (25%)

  Fly   445 NENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYD--SNVESDSDDDSD 507
            |:.:.||..|......:::::........:....:..:..:.:.:|.....  |.|::|:.....
  Fly   122 NQGQVDANTAAQLQHQQQQQQQQQQQQQQQHQQQQQMQQQQQQQNVINSASPMSRVKADAKPRGR 186

  Fly   508 ASGGGGDSDGAKKKKEKK------------------------SEKKEKKEKKHKEKERTK----- 543
            .:.........:::.:||                        .|||...|...|:|:|.:
  Fly   187 MTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQN 251

  Fly   544 ------------KPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKEL 596
                        |..|:.||...|||:.:||..:.||.|..:|..||...|.:|||:.|..|.::
  Fly   252 YVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDV 316

  Fly   597 --KDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRKTEPSPSKKANTSGSGFKS 659
              :.|.|:|..|.:||.||..||..||          ..||.:..     :||.:|:......|:
  Fly   317 DPEVKQKYESMAERDKARYEREMTEYK----------TSGKIAMS-----APSMQASMQAQAQKA 366

  Fly   660 --------------KEYISDDDSTSSDDE 674
                          :|...|||....|||
  Fly   367 ALLAAAAQQQHQQLEEQHDDDDGDGDDDE 395

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ssrp	NP_523830.2	POB3	20..499	CDD:227494	6/55 (11%)
		SSrecog	75..284	CDD:281523
		PH2_SSRP1-like	332..427	CDD:270051
		HMG_box	557..620	CDD:278906	25/64 (39%)
Dsp1	NP_001138203.1	HMG-box	182..252	CDD:294061	9/69 (13%)
		HMGB-UBF_HMG-box	275..339	CDD:238686	25/63 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45450768
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840