DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5539 and REEP4

DIOPT Version :10

Sequence 1:NP_611831.2 Gene:CG5539 / 37766 FlyBaseID:FBgn0034907 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_079508.2 Gene:REEP4 / 80346 HGNCID:26176 Length:257 Species:Homo sapiens


Alignment Length:283 Identity:62/283 - (21%)
Similarity:124/283 - (43%) Gaps:62/283 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LVSQFLFFVYGTMGPAWQTYKTLNSGD-EEFLAWAKYWIVYAFLVTFEVLADVFLSWLPLYMPTK 69
            ::.:.:..|:|.:.||:.:||.:.:.: .|::.|..||||:|..:..|::.|:|:||.|.|...|
Human     5 MICRLVVLVFGMLCPAYASYKAVKTKNIREYVRWMMYWIVFALFMAAEIVTDIFISWFPFYYEIK 69

  Fly    70 LLLVVWIVLSAPAANVWIFDAILRPVLAKRQEEIDHFLHRGKEK------------LLIDALASM 122
            :..|:|::.........::...:.|.|::.::|||.::.:.||:            |.|.|.|::
Human    70 MAFVLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDAYIVQAKERSYETVLSFGKRGLNIAASAAV 134

  Fly   123 TQLVAQTQISVLPFVSSFWSRSSTAPLRT-SD----------LLQDST-------GEGIGGRTSE 169
             |...::|.::...:.||    |...||: ||          .|:|..       |...||....
Human   135 -QAATKSQGALAGRLRSF----SMQDLRSISDAPAPAYHDPLYLEDQVSHRRPPIGYRAGGLQDS 194

  Fly   170 DTDSANVSVQNLSSGSSPVGSLEHLRDDSEELLVGVSKATTHLQAEQFQSDVSSESPRIINRRPQ 234
            ||:                   :....|:|    .|.:|....:.:..   :.|:|.|::.|:|.
Human   195 DTE-------------------DECWSDTE----AVPRAPARPREKPL---IRSQSLRVVKRKPP 233

  Fly   235 RKFKNAIAIASATKLEDLHDDVE 257
            .:...:.::...|:.:.:..||:
Human   234 VREGTSRSLKVRTRKKTVPSDVD 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5539NP_611831.2 TB2_DP1_HVA22 20..94 CDD:460820 21/74 (28%)
REEP4NP_079508.2 TB2_DP1_HVA22 19..94 CDD:460820 21/74 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..257 17/100 (17%)

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