DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5539 and REEP1

DIOPT Version :10

Sequence 1:NP_611831.2 Gene:CG5539 / 37766 FlyBaseID:FBgn0034907 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_001358208.1 Gene:REEP1 / 65055 HGNCID:25786 Length:284 Species:Homo sapiens


Alignment Length:290 Identity:70/290 - (24%)
Similarity:117/290 - (40%) Gaps:59/290 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LVSQFLFFVYGTMGPAWQTYKTLNSGD-EEFLAWAKYWIVYAFLVTFEVLADVFLSWLPLYMPTK 69
            ::|:.:..::||:.||:.:||.:.|.| :|::.|..|||::|...|.|...|:||.|.|.|...|
Human     5 IISRLVVLIFGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTTAETFTDIFLCWFPFYYELK 69

  Fly    70 LLLVVWIVLSAPAANVWIFDAILRPVLAKRQEEIDHFLHRGKEKLLIDALASMTQLVAQTQISVL 134
            :..|.|::......:..::...:.|.|:.:::|||..|.:.|:: ..|||....:.......:..
Human    70 IAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDR-SYDALVHFGKRGLNVAATAA 133

  Fly   135 PFVSSFWSRSSTAPLRTSDLLQDST---GEGI----------GGRTSEDTDSANVSVQNLSSGSS 186
            ...:|....:.:..|| |..:||.|   |:|.          .||.|.......:|.....|.||
Human   134 VMAASKGQGALSERLR-SFSMQDLTTIRGDGAPAPSGPPPPGSGRASGKHGQPKMSRSASESASS 197

  Fly   187 PV-------------------GSLE----H-------LRDDSEELLVGVS---KATTHLQAEQFQ 218
            .|                   |.::    |       ..||.||.|:...   ||...::..   
Human   198 SVCTCCSTCRTWKVVEGDVNEGGMKAWEPHQVQNPLAFSDDEEEDLLDFMYKYKAPRRMELP--- 259

  Fly   219 SDVSSESPRIINRRPQRKFKNAIAIASATK 248
               ....|||:..|    |:.....:|||:
Human   260 ---LEAPPRILRSR----FRKKSTSSSATE 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5539NP_611831.2 TB2_DP1_HVA22 20..94 CDD:460820 23/74 (31%)
REEP1NP_001358208.1 TB2_DP1_HVA22 19..94 CDD:460820 23/74 (31%)

Return to query results.
Submit another query.