Protein Alignment CG5539 and reep3a

DIOPT Version :10

• Sequence 1: NP_611831.2
• Gene: CG5539 / 37766
• FlyBaseID: FBgn0034907
• Length: 296
• Species: Drosophila melanogaster
• Sequence 2: NP_001032664.2
• Gene: reep3a / 641577
• ZFINID: ZDB-GENE-051127-47
• Length: 249
• Species: Danio rerio
• Alignment Length: 209
• Identity: 58/209 - (27%)
• Similarity: 95/209 - (45%)
• Gaps: 31/209 - (14%)

  Fly     6 LVSQFLFFVYGTMGPAWQTYKTLNSGD-EEFLAWAKYWIVYAFLVTFEVLADVFLSWLPLYMPTK 69
            ::|:.:..|:||:.||:.::|.:.|.: :|::.|..||||:|.....|.:.|:.|:|.|:|...|
Zfish     5 IISRVIVLVFGTLYPAYYSFKAVKSKNVKEYVRWMMYWIVFALYTVVETITDLSLAWFPVYYELK 69

  Fly    70 LLLVVWIVLSAPAANVWIFDAILRPVLAKRQEEIDHFLHRGKEK------------LLIDALASM 122
            :..|.|::.........|:...|.|:||.::.|||.::.:.:|:            |.|.|.|::
Zfish    70 MAFVFWLLSPYTRGASVIYRKFLHPMLASKEREIDEYIVQARERSYETMVNFGRQGLTIAAAAAV 134

  Fly   123 TQLV-AQTQIS------------VLPFVSSFWSRSSTAPLRTSDL-LQDSTGEG----IGGRTSE 169
            |..| .|..||            .:|...|....||...|..:|. ....||||    ..|..||
Zfish   135 TAAVKGQGAISERLRSFSIPDLTQVPSEQSAIFNSSRRALPPADSEPYKQTGEGHEEETDGIFSE 199

  Fly   170 DTDSANVSVQNLSS 183
            |..|....::...|
Zfish   200 DEASVQKGLRRSQS 213

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5539	NP_611831.2	TB2_DP1_HVA22	20..94	CDD:460820	22/74 (30%)
reep3a	NP_001032664.2	TB2_DP1_HVA22	19..95	CDD:460820	22/75 (29%)