DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5539 and zgc:101744

DIOPT Version :10

Sequence 1:NP_611831.2 Gene:CG5539 / 37766 FlyBaseID:FBgn0034907 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_001013554.2 Gene:zgc:101744 / 541409 ZFINID:ZDB-GENE-050320-111 Length:184 Species:Danio rerio


Alignment Length:132 Identity:37/132 - (28%)
Similarity:61/132 - (46%) Gaps:21/132 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LVSQFLFFVYGT---------MGPAWQTYKTLNSGD-EEFLAWAKYWIVYAFLVTFEVLADVFLS 60
            :|:.:|.|.||.         :.||:.:.|.:.|.: |:...|..||:||......|..:|:||.
Zfish    44 IVAFYLIFGYGASLLCNLIGFIYPAYASIKAIESNNKEDDTKWLTYWVVYGLFSVAEFFSDIFLF 108

  Fly    61 WLPLYMPTKLLLVVWIVLSAPAANVW-----IFDAILRPVLAKRQEEIDHFLH--RGKEKLLIDA 118
            |.|.|...|.|.::|.:  ||.:  |     |:..::||...|.:...|:.:.  .||.|...:.
Zfish   109 WFPFYYAGKCLFLLWCM--APIS--WNGSQVIYTRVVRPFFLKHEAAFDNVVSDLSGKAKSAAET 169

  Fly   119 LA 120
            :|
Zfish   170 MA 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5539NP_611831.2 TB2_DP1_HVA22 20..94 CDD:460820 24/79 (30%)
zgc:101744NP_001013554.2 TB2_DP1_HVA22 67..144 CDD:460820 25/80 (31%)

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