DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5539 and REEP2

DIOPT Version :10

Sequence 1:NP_611831.2 Gene:CG5539 / 37766 FlyBaseID:FBgn0034907 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_001258732.1 Gene:REEP2 / 51308 HGNCID:17975 Length:254 Species:Homo sapiens


Alignment Length:277 Identity:67/277 - (24%)
Similarity:125/277 - (45%) Gaps:45/277 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LVSQFLFFVYGTMGPAWQTYKTLNSGD-EEFLAWAKYWIVYAFLVTFEVLADVFLSWLPLYMPTK 69
            ::|:.:..::||:.||:.:||.:.:.: :|::.|..||||:||..|.|.|.|:.|||.|.|...|
Human     5 IISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLSWFPFYFELK 69

  Fly    70 LLLVVWIVLSAPAANVWIFDAILRPVLAKRQEEIDHFLHR------------GKEKLLIDALASM 122
            :..|:|::......:..::...:.|.|:.:::|||.::.:            ||..|.:.|.|::
Human    70 IAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAV 134

  Fly   123 TQLVAQTQISVLPFVSSFWSRSSTAPLRTSDLLQDSTGEGIGGRTSEDTDSANVSVQNLSSGSSP 187
            | ..|:.|..:...:.|| |......:|..|.|.....:   ||......|...::::|  |..|
Human   135 T-AAAKGQGVLSEKLRSF-SMQDLTLIRDEDALPLQRPD---GRLRPSPGSLLDTIEDL--GDDP 192

  Fly   188 VGSLEHLRDDSEELLVGVSKATTHLQAEQFQSDVSSESPRIINRRPQRKFKNAIAIASATKLEDL 252
            ..||....:.::.            :.|..:.|:..::|:  ..:|.:|...|..:||.|     
Human   193 ALSLRSSTNPADS------------RTEASEDDMGDKAPK--RAKPIKKAPKAEPLASKT----- 238

  Fly   253 HDDVEDLLAKTAMETSG 269
                  |..:...:|||
Human   239 ------LKTRPKKKTSG 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5539NP_611831.2 TB2_DP1_HVA22 20..94 CDD:460820 24/74 (32%)
REEP2NP_001258732.1 TB2_DP1_HVA22 19..94 CDD:460820 24/74 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 167..254 21/113 (19%)

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