DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5539 and Reep2

DIOPT Version :10

Sequence 1:NP_611831.2 Gene:CG5539 / 37766 FlyBaseID:FBgn0034907 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_659114.2 Gene:Reep2 / 225362 MGIID:2385070 Length:254 Species:Mus musculus


Alignment Length:257 Identity:67/257 - (26%)
Similarity:122/257 - (47%) Gaps:38/257 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LVSQFLFFVYGTMGPAWQTYKTLNSGD-EEFLAWAKYWIVYAFLVTFEVLADVFLSWLPLYMPTK 69
            ::|:.:..::||:.||:.:||.:.:.: :|::.|..||||:||..|.|.|.|:.|||.|.|...|
Mouse     5 IISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIILSWFPFYFELK 69

  Fly    70 LLLVVWIVLSAPAANVWIFDAILRPVLAKRQEEIDHFLHR------------GKEKLLIDALASM 122
            :..|:|::......:..::...:.|.|:.:::|||.::.:            ||..|.:.|.|::
Mouse    70 IAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAV 134

  Fly   123 TQLVAQTQISVLPFVSSFWSRSSTAPLRTSDLLQDSTGEGIGGRTSEDTDSANVSVQNLSSGSSP 187
            | ..|:.|..:...:.|| |......:|..|.|   ..:|..||              |..|  |
Mouse   135 T-AAAKGQGVLSEKLRSF-SMQDLTLIRDEDAL---PLQGPDGR--------------LQPG--P 178

  Fly   188 VGSLEHLRDDSEELLVGVSKATTH--LQAEQFQSDVSSESPRIINRRPQRKFKNAIAIASAT 247
            ||.|:.:.|..:|..:.:..:|:.  .:.|..:.|:..::|:  ..:|.:|...|...||.|
Mouse   179 VGLLDTIEDLGDEPALSLRSSTSQPDPRTETSEDDLGDKAPK--RTKPIKKVPRAEPPASKT 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5539NP_611831.2 TB2_DP1_HVA22 20..94 CDD:460820 24/74 (32%)
Reep2NP_659114.2 TB2_DP1_HVA22 19..94 CDD:460820 24/74 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..254 10/47 (21%)

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