DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5539 and REEP3

DIOPT Version :10

Sequence 1:NP_611831.2 Gene:CG5539 / 37766 FlyBaseID:FBgn0034907 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_001001330.1 Gene:REEP3 / 221035 HGNCID:23711 Length:255 Species:Homo sapiens


Alignment Length:261 Identity:62/261 - (23%)
Similarity:114/261 - (43%) Gaps:39/261 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LVSQFLFFVYGTMGPAWQTYKTLNSGD-EEFLAWAKYWIVYAFLVTFEVLADVFLSWLPLYMPTK 69
            ::|:.:..|:|.:.||:.:||.:.:.: :|::.|..||||:|.....|.:||..::|.|||...|
Human     5 MISRAVVLVFGMLYPAYYSYKAVKTKNVKEYVRWMMYWIVFALYTVIETVADQTVAWFPLYYELK 69

  Fly    70 LLLVVWIVLSAPAANVWIFDAILRPVLAKRQEEIDHFLHRGKEK------------LLIDALASM 122
            :..|:|::.........|:...|.|:|:.::.|||.::.:.||:            |.:.|.|::
Human    70 IAFVIWLLSPYTKGASLIYRKFLHPLLSSKEREIDDYIVQAKERGYETMVNFGRQGLNLAATAAV 134

  Fly   123 TQLVAQTQISVLPFVSSFWSRSSTAPLRTSDLLQDSTGEGIGGRTSEDTDSANVSVQNLSSGSS- 186
            |..| ::|.::...:.||         ...||......|.:|.|..:....|....:...|.|: 
Human   135 TAAV-KSQGAITERLRSF---------SMHDLTTIQGDEPVGQRPYQPLPEAKKKSKPAPSESAG 189

  Fly   187 ---PVGSLEHLRDDSEELLVGVSKATTH--LQAEQFQSDVSSESPR----------IINRRPQRK 236
               |:...:...|:..|.....::..||  |:..|....|.:...|          .:.:|||..
Human   190 YGIPLKDGDEKTDEEAEGPYSDNEMLTHKGLRRSQSMKSVKTTKGRKEVRYGSLKYKVKKRPQVY 254

  Fly   237 F 237
            |
Human   255 F 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5539NP_611831.2 TB2_DP1_HVA22 20..94 CDD:460820 23/74 (31%)
REEP3NP_001001330.1 TB2_DP1_HVA22 19..95 CDD:460820 23/75 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 158..242 15/83 (18%)

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