DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5539 and T03F6.6

DIOPT Version :10

Sequence 1:NP_611831.2 Gene:CG5539 / 37766 FlyBaseID:FBgn0034907 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_499756.3 Gene:T03F6.6 / 176759 WormBaseID:WBGene00011401 Length:207 Species:Caenorhabditis elegans


Alignment Length:110 Identity:21/110 - (19%)
Similarity:48/110 - (43%) Gaps:4/110 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 CFFGLVSQFLFFVYGTMGPAWQTYKTLNS----GDEEFLAWAKYWIVYAFLVTFEVLADVFLSWL 62
            |.:.::.....||...:|.|:..|.::.:    |.::...|..||.|:......:..|...:|:.
 Worm    68 CVYMIIGSGAEFVCNLIGVAYPAYVSVKAIRTEGTDDDTMWLIYWTVFGAFSIIDFFAASIMSYF 132

  Fly    63 PLYMPTKLLLVVWIVLSAPAANVWIFDAILRPVLAKRQEEIDHFL 107
            |:|...|...::::.|.....:..|:..::.|.:|..::.:...|
 Worm   133 PIYWVAKAAFLLYLYLPETHGSHVIYHQLIDPFVAHMEKSMSRKL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5539NP_611831.2 TB2_DP1_HVA22 20..94 CDD:460820 14/77 (18%)
T03F6.6NP_499756.3 TB2_DP1_HVA22 89..165 CDD:460820 13/75 (17%)

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