DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15800 and SK18

DIOPT Version :10

Sequence 1:NP_611828.1 Gene:CG15800 / 37763 FlyBaseID:FBgn0034904 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_563864.2 Gene:SK18 / 837562 AraportID:AT1G10230 Length:158 Species:Arabidopsis thaliana


Alignment Length:156 Identity:40/156 - (25%)
Similarity:75/156 - (48%) Gaps:22/156 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DGRTISVNLALLEKSLVIREMCRVGQVPEDEDFVLPLHGIHSNVLLKILLWAEYHEKHEEPAWVD 72
            ||.:..::.|:..|.|:|..|.......|    .:||..:..::|.||:.:|:.|.  .||:..|
plant    12 DGESFEIDEAVARKFLIIVHMMEDNCAGE----AIPLENVTGDILSKIIEYAKMHV--NEPSEED 70

  Fly    73 SKDPLPAEEIELQISDWDKEFL-RVEIDSICKIMEGCNYLDIPWLYKLCAQKLV-FLSSREPETQ 135
            ..     ||.:..:..||.:|: ::::::|.||:...|||:...|....:|.:. ::..:.||. 
plant    71 ED-----EEAKKNLDSWDAKFMEKLDLETIFKIILAANYLNFEGLLGFASQTVADYIKDKTPEE- 129

  Fly   136 FSGYVEKIPRFQDHFI----EQIQKE 157
                |.:|...::.|.    |:|:||
plant   130 ----VREIFNIENDFTPEEEEEIRKE 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15800NP_611828.1 BTB_POZ 1..123 CDD:453885 30/115 (26%)
SK18NP_563864.2 BTB_POZ_SKP1 5..122 CDD:349631 31/120 (26%)
Skp1 108..154 CDD:460222 11/49 (22%)

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