DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15800 and AT5G42190

DIOPT Version :9

Sequence 1:NP_611828.1 Gene:CG15800 / 37763 FlyBaseID:FBgn0034904 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_568603.1 Gene:AT5G42190 / 834224 AraportID:AT5G42190 Length:171 Species:Arabidopsis thaliana


Alignment Length:176 Identity:39/176 - (22%)
Similarity:76/176 - (43%) Gaps:37/176 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VRFETRDGRTISVNLALLEKSLVIREMCRVGQVPEDE--DFVLPLHGIHSNVLLKILLWAEYHEK 64
            :..::.||....::.|:..:|..|:.|.      ||:  |..:||..:.|.:|.|::   ||.::
plant     7 ITLKSSDGENFEIDEAVALESQTIKHMI------EDDCTDNGIPLPNVTSKILSKVI---EYCKR 62

  Fly    65 HEEPAWVDSKDPLPAE-------------EIELQISDWDKEFLRVEIDSICKIMEGCNYLDIPWL 116
            |.|.|   .|....|:             ..:..:..||.||::|:..::..::...|||:|..|
plant    63 HVEAA---EKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGL 124

  Fly   117 YKLCAQKLV-FLSSREPETQFSGYVEKIPRFQDHFI----EQIQKE 157
            ..|..|.:. .:..:.||.     :.|....::.|.    |::::|
plant   125 LDLTCQTVADMIKGKTPEE-----IRKTFNIKNDFTPEEEEEVRRE 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15800NP_611828.1 BTB 1..113 CDD:295341 29/125 (23%)
AT5G42190NP_568603.1 BTB_POZ_SKP1 6..136 CDD:349631 33/140 (24%)
Skp1 122..169 CDD:396171 9/49 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5201
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11165
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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