DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15800 and SK5

DIOPT Version :9

Sequence 1:NP_611828.1 Gene:CG15800 / 37763 FlyBaseID:FBgn0034904 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_567091.1 Gene:SK5 / 825172 AraportID:AT3G60020 Length:153 Species:Arabidopsis thaliana


Alignment Length:139 Identity:36/139 - (25%)
Similarity:66/139 - (47%) Gaps:26/139 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VRFETRDGRTISVNLALLEKSLVIREMCRVGQVPEDEDFVLPLHGIHSNVLLKILLWAEYHEKHE 66
            :..::.||::..::..:..||:.|..|...|...:    |:||..:.|.: |||::  :|.||| 
plant     5 IMLKSSDGKSFEIDEDVARKSIAINHMVEDGCATD----VIPLRNVTSKI-LKIVI--DYCEKH- 61

  Fly    67 EPAWVDSKDPLPAEEIELQISDWDKEFLR-VEIDSICKIMEGCNYLDIPWLYKLCAQKLV----- 125
                |.||:       |..:.:||.:|:: :|...:..:|...|||:|..|..|..:.:.     
plant    62 ----VKSKE-------EEDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLTCKTVSDLLQA 115

  Fly   126 -FLSSREPE 133
             .||.:.|:
plant   116 DLLSGKTPD 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15800NP_611828.1 BTB 1..113 CDD:295341 30/111 (27%)
SK5NP_567091.1 BTB_POZ_SKP1 4..112 CDD:349631 33/125 (26%)
Skp1 99..151 CDD:396171 5/26 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5201
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11165
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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