DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15800 and SK13

DIOPT Version :9

Sequence 1:NP_611828.1 Gene:CG15800 / 37763 FlyBaseID:FBgn0034904 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_567090.1 Gene:SK13 / 825171 AraportID:AT3G60010 Length:154 Species:Arabidopsis thaliana


Alignment Length:167 Identity:41/167 - (24%)
Similarity:76/167 - (45%) Gaps:32/167 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVRFETRDGRTISVNLALLEKSLVIREMCRVGQVPEDEDFV---LPLHGIHSNVLLKILLWAEYH 62
            ||...:.||.:..|..|:..:|..|..|.       ::|.|   :|:..:...:|.|::   ||.
plant     4 MVMLLSSDGESFQVEEAVAVQSQTIAHMI-------EDDCVANGVPIANVTGVILSKVI---EYC 58

  Fly    63 EKHEEPAWVDSKDPLPAEEIELQISDWDKEFLRV--EIDSICKIMEGCNYLDIPWLYKLCAQKLV 125
            :||   ...||    |.||.:.::..||.||::.  :..::..:|...|||:|..|..|..|.:.
plant    59 KKH---VVSDS----PTEESKDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVA 116

  Fly   126 -FLSSREPETQFSGYVEKIPRFQDHFI----EQIQKE 157
             .::.::|:.     :..:...::.|.    |:|:||
plant   117 DMITGKKPDE-----IRALLGIENDFTPEEEEEIRKE 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15800NP_611828.1 BTB 1..113 CDD:295341 31/116 (27%)
SK13NP_567090.1 BTB_POZ_SKP1 4..119 CDD:349631 35/131 (27%)
Skp1 105..152 CDD:396171 9/49 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5201
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11165
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.