DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15800 and SK3

DIOPT Version :9

Sequence 1:NP_611828.1 Gene:CG15800 / 37763 FlyBaseID:FBgn0034904 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_565604.1 Gene:SK3 / 817111 AraportID:AT2G25700 Length:163 Species:Arabidopsis thaliana


Alignment Length:155 Identity:40/155 - (25%)
Similarity:71/155 - (45%) Gaps:26/155 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVRFETRDGRTISVNLALLEKSLVIREMCRVGQVPEDE--DFVLPLHGIHSNVLLKILLWAEYHE 63
            |:..::.||.:..|..|:..:|..|:.|.      ||:  |..:||..:...:|.|::   ||.:
plant     7 MIILKSSDGESFEVEEAVAVESQTIKHMI------EDDCVDNGIPLPNVTGAILAKVI---EYCK 62

  Fly    64 KHEEPAWV--DSKDPLPAEEIELQISDWDKEFLRVEIDSICKIMEGCNYLDIPWLYKLCAQKLVF 126
            ||.|.|..  ..||...:.| ..::..||.:|::|:..::..::...|||:|..|..|..:.:. 
plant    63 KHVEAAAEAGGDKDFYGSTE-NHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKAVA- 125

  Fly   127 LSSREPETQFSGYVEKIP-RFQDHF 150
                   .|..|   |.| :.::||
plant   126 -------DQMRG---KTPAQMREHF 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15800NP_611828.1 BTB 1..113 CDD:295341 31/115 (27%)
SK3NP_565604.1 BTB_POZ_SKP1 7..128 CDD:349631 34/138 (25%)
Skp1 115..161 CDD:396171 8/37 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5201
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11165
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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