DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15800 and SK14

DIOPT Version :9

Sequence 1:NP_611828.1 Gene:CG15800 / 37763 FlyBaseID:FBgn0034904 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_565296.1 Gene:SK14 / 814846 AraportID:AT2G03170 Length:149 Species:Arabidopsis thaliana


Alignment Length:161 Identity:41/161 - (25%)
Similarity:70/161 - (43%) Gaps:40/161 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DGRTISVNLALLEKSLVIREM----CRVGQVPEDEDFVLPLHGIHSNVLLKIL-LWAEYHEKHEE 67
            ||.:..|..|:..|..::..|    |.|.:||            ..||..||| :..||.:||. 
plant    12 DGESFEVEEAVARKLKIVEHMIEDDCVVTEVP------------LQNVTGKILSIVVEYCKKHV- 63

  Fly    68 PAWVDSKDPLPAEEIELQISDWDKEFL-RVEIDSICKIMEGCNYLDIPWLYKLCAQKLV-FLSSR 130
               ||       ||.: :...||:||: :.:..::.:::...|||:|..|..|.||.:. .:..:
plant    64 ---VD-------EESD-EFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDK 117

  Fly   131 EPETQFSGYVEKIPRFQDHFIEQ----IQKE 157
            .||.     :.:|...::.|..:    ::||
plant   118 TPEE-----IREIFNIENDFTPEEEAAVRKE 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15800NP_611828.1 BTB 1..113 CDD:295341 30/110 (27%)
SK14NP_565296.1 SKP1 3..147 CDD:227528 41/161 (25%)
Skp1 3..99 CDD:214704 30/110 (27%)
Skp1 72..147 CDD:279768 18/77 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5201
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11165
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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