DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15800 and skr-14

DIOPT Version :10

Sequence 1:NP_611828.1 Gene:CG15800 / 37763 FlyBaseID:FBgn0034904 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_504220.4 Gene:skr-14 / 178839 WormBaseID:WBGene00004820 Length:168 Species:Caenorhabditis elegans


Alignment Length:79 Identity:19/79 - (24%)
Similarity:40/79 - (50%) Gaps:14/79 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LPLHGIHSNVLLKILLWAEYHEKHEEPAWVDSKDPLPAEEIE----LQISDWDKEFLRVEIDSIC 102
            :|:..::...:.|:..|.|.|          :.|.:|.:.:.    |.|.:||::||::|.:::.
 Worm    58 IPVTNVNGKTMEKVAEWCEKH----------NADAIPEDNMNVLKTLTIPEWDQKFLKIEDEALF 112

  Fly   103 KIMEGCNYLDIPWL 116
            .::...|:|||..|
 Worm   113 DLILASNFLDIKGL 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15800NP_611828.1 BTB_POZ 1..123 CDD:453885 19/79 (24%)
skr-14NP_504220.4 BTB_POZ_SKP1 14..138 CDD:349631 19/79 (24%)
Skp1 124..>161 CDD:460222 1/3 (33%)

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