DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15800 and skr-14

DIOPT Version :9

Sequence 1:NP_611828.1 Gene:CG15800 / 37763 FlyBaseID:FBgn0034904 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_504220.4 Gene:skr-14 / 178839 WormBaseID:WBGene00004820 Length:168 Species:Caenorhabditis elegans


Alignment Length:79 Identity:19/79 - (24%)
Similarity:40/79 - (50%) Gaps:14/79 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LPLHGIHSNVLLKILLWAEYHEKHEEPAWVDSKDPLPAEEIE----LQISDWDKEFLRVEIDSIC 102
            :|:..::...:.|:..|.|.|          :.|.:|.:.:.    |.|.:||::||::|.:::.
 Worm    58 IPVTNVNGKTMEKVAEWCEKH----------NADAIPEDNMNVLKTLTIPEWDQKFLKIEDEALF 112

  Fly   103 KIMEGCNYLDIPWL 116
            .::...|:|||..|
 Worm   113 DLILASNFLDIKGL 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15800NP_611828.1 BTB 1..113 CDD:295341 16/74 (22%)
skr-14NP_504220.4 Skp1 12..123 CDD:214704 16/74 (22%)
Skp1 97..161 CDD:279768 10/30 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5201
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S272
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11165
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.820

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