DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15800 and skr-8

DIOPT Version :9

Sequence 1:NP_611828.1 Gene:CG15800 / 37763 FlyBaseID:FBgn0034904 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_503044.1 Gene:skr-8 / 178495 WormBaseID:WBGene00004814 Length:194 Species:Caenorhabditis elegans


Alignment Length:167 Identity:41/167 - (24%)
Similarity:77/167 - (46%) Gaps:25/167 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVRFETRDGRTISVNLALLEKSLVIREM---CRVGQVPEDEDFV--LPLHGIHSNVLLKILLWAE 60
            |.:.|:.||:...::...:::|.::..:   |    .|||...:  :|:..:..|:|..::.|. 
 Worm    22 MYKVESNDGKVFEISDEAVKQSNILSNLISTC----APEDVASMDPIPITNVTGNILKMVIEWC- 81

  Fly    61 YHEKHEEPAWVDSKDPLPAEEIELQISDWDKEFLRVEIDSICKIMEGCNYLDIPWLY----KLCA 121
              |||:..|.....|.:|.   .:.:.:||..||:::.:.:..::..|||||:|.|.    |:.|
 Worm    82 --EKHKGEALPVEDDSVPK---NINVPEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVA 141

  Fly   122 QKLVFLSSREPETQFSGYVEKIPR-FQDHFIEQIQKE 157
            ...:..|..|....|:     ||. .:|...|:..||
 Worm   142 NMAIGKSPDELRIIFA-----IPTDEEDEAAERAAKE 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15800NP_611828.1 BTB 1..113 CDD:295341 27/116 (23%)
skr-8NP_503044.1 Skp1 20..129 CDD:214704 27/116 (23%)
Skp1 103..>161 CDD:279768 18/62 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5201
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11165
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
54.870

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