DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15800 and skr-9

DIOPT Version :10

Sequence 1:NP_611828.1 Gene:CG15800 / 37763 FlyBaseID:FBgn0034904 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_503043.1 Gene:skr-9 / 178494 WormBaseID:WBGene00004815 Length:194 Species:Caenorhabditis elegans


Alignment Length:167 Identity:42/167 - (25%)
Similarity:77/167 - (46%) Gaps:25/167 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVRFETRDGRTISVNLALLEKSLVIREM---CRVGQVPEDEDFV--LPLHGIHSNVLLKILLWAE 60
            |.:.|:.||:...::...:::|.::..:   |    .|||...:  :|:..:..|:|..::.|. 
 Worm    22 MYKVESNDGKVFEISDEAVKQSNILSNLISTC----APEDVASMDPIPITNVIGNILKMVIEWC- 81

  Fly    61 YHEKHEEPAWVDSKDPLPAEEIELQISDWDKEFLRVEIDSICKIMEGCNYLDIPWLY----KLCA 121
              |||:..|.....|.:|.   .:.:.:||..||:::.|.:..::..|||||:|.|.    |:.|
 Worm    82 --EKHKGEALPVEDDSVPK---HVNVPEWDTNFLKIDNDVLFDLIVACNYLDVPGLMNYGCKIVA 141

  Fly   122 QKLVFLSSREPETQFSGYVEKIPR-FQDHFIEQIQKE 157
            ...:..|..|....|:     ||. .:|...|:..||
 Worm   142 MMAIGKSPDELRIIFA-----IPTDEEDEAAERAAKE 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15800NP_611828.1 BTB_POZ 1..123 CDD:453885 33/130 (25%)
skr-9NP_503043.1 BTB_POZ_SKP1 22..144 CDD:349631 33/131 (25%)
Skp1 130..>161 CDD:460222 9/35 (26%)

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