DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15800 and skr-17

DIOPT Version :9

Sequence 1:NP_611828.1 Gene:CG15800 / 37763 FlyBaseID:FBgn0034904 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001379551.1 Gene:skr-17 / 174257 WormBaseID:WBGene00004823 Length:180 Species:Caenorhabditis elegans


Alignment Length:127 Identity:30/127 - (23%)
Similarity:62/127 - (48%) Gaps:23/127 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVRFETRDGRTISVNL-ALLEKSLVIREMCRVGQVPEDEDFVLPLHGIH-SNVL---LKILL-WA 59
            :::..:.||..:..:: |||..|.:...:..:|.   |:::...|..:. :||:   ||:|: |.
 Worm    24 LLQLTSSDGHLLQGDIRALLLSSTLAATIRELGY---DKEYCAELKPVPVNNVVGFTLKLLIEWC 85

  Fly    60 EYHEKHEEPAWV----DSKDPLPAEEIELQISDWDKEFL-RVEIDSICKIMEGCNYLDIPWL 116
            :.| |.::||..    |.|:        :.|..||:.|| |:.:.::..::....:||:..|
 Worm    86 DKH-KEDDPAIALAEKDKKN--------ICIPSWDRHFLSRLPMSNLFDLITAAYHLDVTGL 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15800NP_611828.1 BTB 1..113 CDD:295341 28/122 (23%)
skr-17NP_001379551.1 BTB_POZ_SKP1 24..150 CDD:349631 30/127 (24%)
Skp1 137..>166 CDD:396171 1/2 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5201
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11165
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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