DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG15800 and skr-15

DIOPT Version :9

Sequence 1:	NP_611828.1	Gene:	CG15800 / 37763	FlyBaseID:	FBgn0034904	Length:	157	Species:	Drosophila melanogaster
Sequence 2:	NP_494662.1	Gene:	skr-15 / 173729	WormBaseID:	WBGene00004821	Length:	184	Species:	Caenorhabditis elegans

Alignment Length:	134	Identity:	26/134 - (19%)
Similarity:	62/134 - (46%)	Gaps:	14/134 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 ETRDGRTISVNLALLEKSLVI-REMCRVGQVPEDEDFV--LPLHGIHSNVLLKILLWAEYHEKHE 66
            |:.|...:.::...:::|..: ..:..:|...|:.:.:  :|:..::...|..::.|.|:|:...
Worm    24 ESNDRVVLKISEQAIKQSATLSNSITNLGYSAENAESMVPIPIEKVNGKTLKLVVEWCEHHKADP 88

  Fly    67 EP-AWVDSKDPLPAEEIELQISDWDKEFLRVEIDSICKIMEGCNYLDIPWLYKLCAQKLVFLS-S 129
            .| |:......||.         ||::|:.:|.|::..::...|:|::..|...|.:.:..|: .
Worm    89 VPEAYPSGNTVLPV---------WDRKFVDIEHDALTDLVNASNFLEVMTLLTYCCKFIAGLAKG 144

  Fly   130 REPE 133
            ..||
Worm   145 MSPE 148

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG15800	NP_611828.1	BTB	1..113	CDD:295341	21/111 (19%)
skr-15	NP_494662.1	Skp1	20..127	CDD:214704	21/111 (19%)
		SKP1	23..176	CDD:227528	26/134 (19%)
		Skp1	101..167	CDD:279768	13/57 (23%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	4	3.870