DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sona and ADAMTS4

DIOPT Version :9

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_001307265.1 Gene:ADAMTS4 / 9507 HGNCID:220 Length:846 Species:Homo sapiens


Alignment Length:522 Identity:122/522 - (23%)
Similarity:195/522 - (37%) Gaps:130/522 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 AFGQHLNLSLRATQGLFKGAPHQLRMWTV---GSEPNATHGLDLQEIVHEQHTSNDVGEVFQDEK 186
            |||:.|.|.|....|:      |:...||   |..|....|.:....:        .|.:..|.:
Human    87 AFGETLLLELEQDSGV------QVEGLTVQYLGQAPELLGGAEPGTYL--------TGTINGDPE 137

  Fly   187 NMAAILMRRHMETGDLIMEGSI---GHDLVIKPLPHELSPNPE--ESHHIIYKREASAAEGQLSD 246
            ::|::    |.:.|.|:  |.:   |.:|.::||... :||..  ...||:.::..::.:|.:.:
Human   138 SVASL----HWDGGALL--GVLQYRGAELHLQPLEGG-TPNSAGGPGAHILRRKSPASGQGPMCN 195

  Fly   247 FAFMEPDDLLASEKLERLQRRQRRSRRSAPSSPDFEDLNDEDEGALDGEPQVAESRTRSRRQAPY 311
                      ....|.....|.||::|.|..|.                                
Human   196 ----------VKAPLGSPSPRPRRAKRFASLSR-------------------------------- 218

  Fly   312 IIYPEVLVIVDYDGYRLHGGDNLQVKRYFISFWNGVDLRYRLLKGPRIR--ISIAG---IIISRG 371
              :.|.||:.|......||..   :|||.::.   :....:..|.|.||  :|:..   :|:..|
Human   219 --FVETLVVADDKMAAFHGAG---LKRYLLTV---MAAAAKAFKHPSIRNPVSLVVTRLVILGSG 275

  Fly   372 RDATPYLERNRVGRDAIDSAAALTDMGKYLFRERRLPV--------YDIAVAITKLDMCRRTSAY 428
            .      |..:||..|..:      :..:...:|.|..        :|.|:..|:.|:|      
Human   276 E------EGPQVGPSAAQT------LRSFCAWQRGLNTPEDSDPDHFDTAILFTRQDLC------ 322

  Fly   429 GECNRGTAGFAYVGGACVVNKRLEKVNSVAIIEDTGGFSGIIVAAHEVGHLLGAVHDGSPPPSYL 493
            |.....|.|.|.||..|      :...|.||:|| .|......||||:||:...:||.|.|...|
Human   323 GVSTCDTLGMADVGTVC------DPARSCAIVED-DGLQSAFTAAHELGHVFNMLHDNSKPCISL 380

  Fly   494 GGP-GAQRCRWEDGYIMSD-LRHTERGFRWSACTVQSFHHFLNGDTATCLHNAPHEDSALGRSLP 556
            .|| ...|      ::|:. :.|.:....||.|:.:....||:.....||.:.|.....|..:.|
Human   381 NGPLSTSR------HVMAPVMAHVDPEEPWSPCSARFITDFLDNGYGHCLLDKPEAPLHLPVTFP 439

  Fly   557 GTLLSLDAQCRRDRG--TYACFKDERVCAQLFCFDAQTGYCVA---YRPAAEGSACGNGYHCLDG 616
            |.....|.||:...|  :..|.:....||.|:|.....|:.:.   :.|.|:|:.||....|:.|
Human   440 GKDYDADRQCQLTFGPDSRHCPQLPPPCAALWCSGHLNGHAMCQTKHSPWADGTPCGPAQACMGG 504

  Fly   617 RC 618
            ||
Human   505 RC 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 62/243 (26%)
ADAMTS4NP_001307265.1 Pep_M12B_propep 70..181 CDD:279848 27/114 (24%)
Cysteine switch. /evidence=ECO:0000250 192..199 0/16 (0%)
Reprolysin 218..428 CDD:279729 63/280 (23%)
ZnMc_ADAMTS_like 218..425 CDD:239801 62/277 (22%)
ADAM_CR 438..509 CDD:301627 21/69 (30%)
ADAM_CR 490..659 CDD:301627 8/17 (47%)
TSP1 531..575 CDD:214559
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.