DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sona and ADAMTS12

DIOPT Version :9

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:XP_016865394.1 Gene:ADAMTS12 / 81792 HGNCID:14605 Length:1631 Species:Homo sapiens


Alignment Length:656 Identity:147/656 - (22%)
Similarity:239/656 - (36%) Gaps:201/656 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QGLPDLHKQMTPEQLQSVFHVDTHDAVPHYELVQLQHHENNHNRRRRSIGKGPKVNAALPPHHVK 84
            :|||:.| .:.|.::         ||..|:....| |:....:||:|.:                
Human    47 KGLPEYH-VVGPVRV---------DASGHFLSYGL-HYPITSSRRKRDL---------------- 84

  Fly    85 KDLSKNAYYSELKHEALASGGNHLFAPEVSAIKSHNVSFSAFGQHLNLSLRATQGLFKGAPHQLR 149
             |.|::..|..:.||.                           :.|..:|...||....:     
Human    85 -DGSEDWVYYRISHEE---------------------------KDLFFNLTVNQGFLSNS----- 116

  Fly   150 MWTVGSEPNATHGLDLQEIVHEQHTSNDVGEVFQDEKNMAAILMRRHMETGDLIMEGS-IG---- 209
                              .:.|:...|     ....|.||:.....|: :|.::.:|: :|    
Human   117 ------------------YIMEKRYGN-----LSHVKMMASSAPLCHL-SGTVLQQGTRVGTAAL 157

  Fly   210 ---HDLV-IKPLPH-ELSPNPEESH---------HIIYKREASAAEGQLSDFAFMEP-----DDL 255
               |.|. ...||| :....|.:.|         ||:|:|: ...|.:       ||     |.:
Human   158 SACHGLTGFFQLPHGDFFIEPVKKHPLVEGGYHPHIVYRRQ-KVPETK-------EPTCGLKDSV 214

  Fly   256 LASEKLERLQRRQRRSRRSAPSSPDFEDLNDEDEGALDGEPQVAESRTRSRRQAPYIIYPEVLVI 320
            ..|:|.|..  |::..|.:.|                        ||:.|||......:.|.||:
Human   215 NISQKQELW--REKWERHNLP------------------------SRSLSRRSISKERWVETLVV 253

  Fly   321 VDYDGYRLHGGDNLQVKRYFISFWNGV-DLRYRLLKGPRIRISIAGIIISRGRDATPYLERNRVG 384
            .|......||.:|  |:.|.::..|.| .|.:....|..|.|.:..:|:         ||....|
Human   254 ADTKMIEYHGSEN--VESYILTIMNMVTGLFHNPSIGNAIHIVVVRLIL---------LEEEEQG 307

  Fly   385 RDAIDSA-AALTDMGKYLFRERRL-------PV-YDIAVAITKLDMCRRTSAYGECNRGTAGFAY 440
            ...:..| ..|:...|:   ::.:       || :|:||.:|:.|:|...:...|    |.|.::
Human   308 LKIVHHAEKTLSSFCKW---QKSINPKSDLNPVHHDVAVLLTRKDICAGFNRPCE----TLGLSH 365

  Fly   441 VGGACVVNKRLEKVNSVAIIEDTGGFSGIIVA---AHEVGHLLGAVHDGSPPPSYLGGPGAQRCR 502
            :.|.|..::      |..|.||    ||:.:|   |||:||..|..|||........|       
Human   366 LSGMCQPHR------SCNINED----SGLPLAFTIAHELGHSFGIQHDGKENDCEPVG------- 413

  Fly   503 WEDGYIMS-DLRHTERGFRWSACTVQSFHHFLNGDTATCLHNAPHEDSALGRSL-PGTLLSLDAQ 565
             ...|||| .|::......||.|:.:....||:.....||.:.|.:.....:.: ||.:..:..|
Human   414 -RHPYIMSRQLQYDPTPLTWSKCSEEYITRFLDRGWGFCLDDIPKKKGLKSKVIAPGVIYDVHHQ 477

  Fly   566 CRRDRGTYA--CFKDERVCAQLFCFDAQTGYCVA-YRPAAEGSACGNGYHCLDGRCTPL---PSN 624
            |:...|..|  |.:.|.||..|:|  :..|:|.: ...||:|:.||....|:.|:|..:   |.:
Human   478 CQLQYGPNATFCQEVENVCQTLWC--SVKGFCRSKLDAAADGTQCGEKKWCMAGKCITVGKKPES 540

  Fly   625 IIPDYG 630
            |...:|
Human   541 IPGGWG 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 63/242 (26%)
ADAMTS12XP_016865394.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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