DRSC/TRiP Functional Genomics Resources

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Protein Alignment sona and Adamts4

DIOPT Version :10

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_076449.1 Gene:Adamts4 / 66015 RGDID:621242 Length:851 Species:Rattus norvegicus


Alignment Length:519 Identity:123/519 - (23%)
Similarity:195/519 - (37%) Gaps:124/519 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 AFGQHLNLSLRATQGL--------FKG-APHQLRMWTVGSEPNATHGLDLQEIVHEQHTSNDVGE 180
            |||:.|.|.|....|:        :.| ||..|.    |:||    |..|            .|.
  Rat   101 AFGEILLLELEQDPGVQVEGLTVQYLGQAPEMLG----GAEP----GTYL------------TGT 145

  Fly   181 VFQDEKNMAAILMRRHMETGDLIMEGSI---GHDLVIKPLP-HELSPNPEESHHIIYKREASAAE 241
            :..|.:::|::    |.:.|.|:  |.:   |.:|.::||. ..|:.......||:.::..::..
  Rat   146 INGDPESVASL----HWDRGALL--GVLQYRGAELHLQPLEGGALNSAGGPGAHILRRKSPASNR 204

  Fly   242 GQLSDFAFMEPDDLLASEKLERLQRRQRRSRRSAPSSPDFEDLNDEDEGALDGEPQVAESRTRSR 306
            |.:.:.                          .|||                |.|... || |::
  Rat   205 GPICNV--------------------------KAPS----------------GSPSPI-SR-RNK 225

  Fly   307 RQAPYIIYPEVLVIVDYDGYRLHGGDNLQVKRYFISFWNGVDLRYRLLKGPRIR----ISIAGII 367
            |.|....:.|.||:.|......||..   :|.|.::.   :....:..|.|.||    :.:..::
  Rat   226 RFASLSRFVETLVVADDKMAAFHGAG---LKHYLLTV---MAAAAKAFKHPSIRNPVNLVVTRLV 284

  Fly   368 ISRGRDATPYLERNRVGRDAIDSAAALTDMGKYLF--RERRLPVYDIAVAITKLDMCRRTSAYGE 430
            |.......|     :||..|..:..:.....|.|.  .:.....:|.|:..|:.|:|      |.
  Rat   285 ILGSGQEVP-----QVGPSAAQTLRSFCTWQKGLNPPNDSDPDHFDTAILFTRQDLC------GV 338

  Fly   431 CNRGTAGFAYVGGACVVNKRLEKVNSVAIIEDTGGFSGIIVAAHEVGHLLGAVHDGSPPPSYLGG 495
            ......|.|.||..|      :...|.||:|| .|......||||:||:...:||.|.|.:.|.|
  Rat   339 STCDALGMAGVGTVC------DPARSCAIVED-DGLQSAFTAAHELGHVFNMLHDNSKPCANLNG 396

  Fly   496 PGAQRCRWEDGYIMSD-LRHTERGFRWSACTVQSFHHFLNGDTATCLHNAPHEDSALGRSLPGTL 559
            .|:     ...::|:. :.|.:....||.|:.:....||:.....||.:.|.....|..:.||..
  Rat   397 QGS-----SSRHVMAPVMAHVDPEEPWSPCSARFITDFLDNGYGHCLLDKPEAPLHLPVTFPGKD 456

  Fly   560 LSLDAQCRRDRG--TYACFKDERVCAQLFCFDAQTGYCVA---YRPAAEGSACGNGYHCLDGRC 618
            ...|.||:...|  :..|.:....||.|:||....|:.:.   :.|.|:|:.||....|:.|||
  Rat   457 YDADRQCQLTFGPDSSHCPQLPPPCAALWCFGHLNGHAMCQTKHSPWADGTPCGPAQACMGGRC 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 57/235 (24%)
ADAMTS_CR_2 556..619 CDD:465496 22/68 (32%)
Adamts4NP_076449.1 Pep_M12B_propep 73..195 CDD:460254 29/119 (24%)
ZnMc_ADAMTS_like 232..439 CDD:239801 57/235 (24%)
ADAMTS_CR_2 453..521 CDD:465496 22/68 (32%)
TSP1 545..589 CDD:214559
ADAMTS_CR_3 592..699 CDD:437068
ADAMTS_spacer1 701..816 CDD:461796
Blue background indicates that the domain is not in the aligned region.

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