DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sona and si:ch211-267e7.3

DIOPT Version :9

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:XP_696251.5 Gene:si:ch211-267e7.3 / 567853 ZFINID:ZDB-GENE-070912-265 Length:963 Species:Danio rerio


Alignment Length:440 Identity:85/440 - (19%)
Similarity:140/440 - (31%) Gaps:118/440 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   506 GYIMSDLRHTERGFRWSACTVQSFHHFLNGDTATCLHNAPHEDSALGRSLPGTLLSL-DAQC--- 566
            |.:.|..||         |..|......|.:::.|:..:........:..|.:.:|. ..||   
Zfish    68 GGVRSQERH---------CLQQRLTSTQNINSSFCIGPSKQYQLCTNQPCPNSRISFKQHQCSQF 123

  Fly   567 ------RRDRGTYACFKDERV------CAQLFCFDAQTGYCVAYRPAAEGSACGNGYH---CLDG 616
                  |:.......:.|:.:      | .|.| ...||......||.:|:.|.:|.:   |::|
Zfish   124 NAKAFSRKHYEWVPLYPDDYINISNKPC-DLQC-TTTTGERQLLVPAHDGTFCRDGIYQGVCIEG 186

  Fly   617 RCTPL-------PSNIIPDYG-------------HNYR-----LVYNKIDNKKDAAEDVE----S 652
            :|..:       .|..|...|             ..||     |.|..|.|....|.|::    .
Zfish   187 QCQVVGCDGKLYSSKTIDKCGVCGGNGASCYRVSGTYRKGITQLGYVFITNIPVGATDIQIIERR 251

  Fly   653 SSEETESQEDET-------ESVEDQDE-----GTTSSEEQEDNKIE---QSSAAGGAAAQSTTTA 702
            .:|...:..||.       .||.|..:     ||.....:..|...   :...|.|...|:....
Zfish   252 KTENILALSDEAGHFFFNGNSVIDNPQNFHVAGTVFKYRRPANLFSDGFEYIMAQGPTQQALNVM 316

  Fly   703 RSTTTTTVRTTSTTTTTAKPKSKSFGYLHRSLPERQWMQDNGVLVTTRISSSVSSSSSGSSSGEA 767
            ......  :....|.....|::.:|..  .|.||:.  |.:.::..|...|||:.....:||.|.
Zfish   317 YYNLNG--KMPHITYEYTVPRAPAFPM--TSTPEQP--QISNLMSKTSRDSSVAEPKGNTSSTEH 375

  Fly   768 AATSTRRPTTTTTTQTPNLF---QIYTHE---------------------------LRKQIEYYL 802
            .....|:.....:.|:.:|.   .:..||                           |:.:::..:
Zfish   376 NEIGARKQHEKKSNQSSSLVPQDNVDVHEELLWGLQASVNFSELPALVLFRPASEVLQNELDDEI 440

  Fly   803 HMLQTQQHATKFQPEQ---QQQQSQQQQSIVEIPLVQKSLTNYSVTSSSS 849
            |.|:.|::   |.|:.   ....|....|...|||::..|  |...|.||
Zfish   441 HHLEAQEN---FGPDSNLIDGDSSSSSDSNTSIPLLKSLL--YDGASWSS 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 8/35 (23%)
si:ch211-267e7.3XP_696251.5 TSP1 53..109 CDD:214559 8/49 (16%)
ADAM_spacer1 217..334 CDD:283607 21/118 (18%)
TSP1 637..>660 CDD:214559
TSP1 700..749 CDD:214559
TSP1 752..806 CDD:214559
TSP1 865..918 CDD:214559
PLAC 928..959 CDD:285849
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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