DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sona and adamts10

DIOPT Version :9

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_001116746.1 Gene:adamts10 / 564734 ZFINID:ZDB-GENE-081104-414 Length:1108 Species:Danio rerio


Alignment Length:624 Identity:142/624 - (22%)
Similarity:225/624 - (36%) Gaps:159/624 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PHYELVQLQHHENNHN--RRRRSIGKGPKVNAALPPHHVKKDLSKNAYYSELKHEALASGGNHLF 109
            ||.|  .|...|.:|.  |.|||    .:..:|..|         ..||                
Zfish    54 PHGE--TLSEEETSHGTVRHRRS----TETQSAPEP---------QLYY---------------- 87

  Fly   110 APEVSAIKSHNVSFSAFGQHLNLSLRATQGLFKGAPHQLRMWTVG----SEPNATHGLDLQEIVH 170
                      .:|.|:....|||:|   ||.......::..|..|    |.|.......:..:.|
Zfish    88 ----------QLSTSSTDLLLNLTL---QGGLLSRQFRVEYWKRGRLAWSHPYLPSCHYVGHLQH 139

  Fly   171 EQHTSNDVGEVFQDEKNMAAILMRRHMETGDLIMEGSIGHDLVIKPLPHELSPNPEESH----HI 231
            :.|:|              ::.:........:|:.|  |.:.:|:||....:...|:..    |:
Zfish   140 QPHSS--------------SVALSNCNGLQGVIVAG--GEEYLIEPLVSAKNLTNEDGREGRPHV 188

  Fly   232 IYKREASAAEGQLSDFAFMEPDDLLASEKLERLQRRQRRSRRSAPSSPDFEDLNDEDEGALDGEP 296
            :|||.:...:.       |:....:..||..:.....:|:.:.:|:..              |..
Zfish   189 VYKRSSLRYQN-------MDQSCGVIDEKPGKSYGWWQRTIKPSPNQM--------------GRG 232

  Fly   297 QVAESRTRSRRQAPYIIYPEVLVIVDYDGYRLHGGDNLQVKRYFISFWNGVDLRYRLLK----GP 357
            |:...|:.||.:     :.|.||:.|......||  ...:::|.::..|.|   .:|.:    |.
Zfish   233 QLPLKRSVSRER-----FVETLVVADKMMVSYHG--RRDIEQYILAVMNIV---AKLFQDSSLGN 287

  Fly   358 RIRISIAGIIISRGRDATPYLERNRVGRDAIDS--------------AAALTDMGKYLFRERRLP 408
            .:.|.:..:|:.  .:..|.||.|.....::||              ..|:.|.|        :.
Zfish   288 AVNIVVTRLILL--MEDQPTLEVNHHAGKSLDSFCKWQKSILHRNGHGNAIPDNG--------IA 342

  Fly   409 VYDIAVAITKLDMCRRTSAYGECNRGTAGFAYVGGACVVNKRLEKVNSVAIIEDTGGFSGIIVAA 473
            .:|.||.||:.|:|    .|.....||.|.|.|||.|      |...|.:|.||. |.:.....|
Zfish   343 HHDTAVLITRYDIC----IYKNKPCGTLGLAPVGGMC------EPERSCSINEDI-GLATAFTIA 396

  Fly   474 HEVGHLLGAVHDGSPPPSYLGGPGAQRCRWEDGYIMSDLRHTERGFRWSACTVQSFHHFLNGDTA 538
            ||:||..|..|||      :|.....|.:.....:.:.:......|.||||:.....:||:....
Zfish   397 HEIGHTFGMNHDG------VGNACGVRSQETAKLMAAHITMKTNPFVWSACSRDYITNFLDSGMG 455

  Fly   539 TCLHNA-PHEDSALGRSLPGTLLSLDAQCRRDRGTYA--CFKDERVCAQLFCFDAQTGYCVAYRP 600
            :||:|. |.::.....:.||.....|.|||...|..:  | |...||::|:|.........:..|
Zfish   456 SCLNNVPPKQEFVYPTTAPGQAYDADEQCRFQYGVKSRQC-KYGEVCSELWCMSKGNRCITSSIP 519

  Fly   601 AAEGSAC-----GNGYHCLDGRCTPL---PSNIIPDYGH 631
            ||||:.|     ..|: |....|.|.   |..:...:||
Zfish   520 AAEGTICQTSTIEKGW-CYKRLCVPYGTRPEGVDGGWGH 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 63/246 (26%)
adamts10NP_001116746.1 Pep_M12B_propep 71..189 CDD:279848 30/175 (17%)
Reprolysin 244..462 CDD:279729 65/254 (26%)
ZnMc_ADAMTS_like 244..459 CDD:239801 63/251 (25%)
TSP1 555..607 CDD:214559 2/3 (67%)
ADAM_spacer1 711..823 CDD:283607
TSP1 893..950 CDD:214559
PLAC 1074..1106 CDD:285849
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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