DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sona and adamtsl7

DIOPT Version :9

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:XP_017211532.2 Gene:adamtsl7 / 556634 ZFINID:ZDB-GENE-070816-2 Length:643 Species:Danio rerio


Alignment Length:551 Identity:96/551 - (17%)
Similarity:148/551 - (26%) Gaps:233/551 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 METGDLIMEGSIGHDLVIKPLPHELSPNPEESHHIIYKREASAAEGQLSDFAFMEPDDLLASEKL 261
            |.||:.::.|    |.||        ..|.:.:          |.|  :.|.:..|:::      
Zfish   111 MATGESVING----DWVI--------DRPGQFY----------AAG--TQFTYKRPNEI------ 145

  Fly   262 ERLQRRQRRSRRSAPSSPDFEDLNDEDEGALDGEPQVAESRTRSRRQAPYIIYPEVLVIVDYDGY 326
                 |.|.........|..::||                        .::||.:....|.|: |
Zfish   146 -----RSRAGESITAPGPTNQELN------------------------LFVIYQQPDAAVYYE-Y 180

  Fly   327 RLHGGDNLQVKRYFISFWNGVDLRYRLLKGPRIRISIAGIIISRGRDATPYLERNRVGRDAIDSA 391
            .|....|.....|..|                   |:..::.|.|  ..|..| |.||.:::.| 
Zfish   181 ILPKHTNTHSDAYSYS-------------------SVLPLVESHG--IFPDSE-NSVGENSLSS- 222

  Fly   392 AALTDMGKYLFRERR----------LPVYD-IAVAITKLDMCRRTSAYGECNRGTAGFAYVGGAC 445
                      |...:          :|:|. :|:|.|.   |..|     |..|.....:   .|
Zfish   223 ----------FHPNQVPSDSVTLEPVPLYSWMAMATTP---CSTT-----CGTGNRQVLF---GC 266

  Fly   446 VVNKRLEKVNSVAIIEDTGGFSGIIVAAHEVGHLLGAVHDGSPPPSYLGGPGAQRCR-------W 503
            |     |:.....::||         ....:.|               .||..:.|:       |
Zfish   267 V-----ERATQTTVLED---------LCSSITH---------------PGPQVEECQSQPCPAFW 302

  Fly   504 EDGYIMSDLRHTERGFRWSACTVQSFHHFLNGDTATCLHNAPHEDSALGRSLPGTLLSLDAQCRR 568
            :.|             .||.|            :.||           |   || .......||:
Zfish   303 DVG-------------EWSEC------------SKTC-----------G---PG-FQYRQVICRQ 327

  Fly   569 DRGTYACFKDERVCAQLFCFD---------AQTGYCVAYRPAAEGS----ACGNGYHCLDGRCTP 620
            .:|.:.  ....|.|...|.|         .|...|..::..:|.:    .||.|....:..|..
Zfish   328 TQGQHG--SSTVVVANSMCDDTEMPDTTSVCQLKICSEWQIRSEWTECSVPCGVGQRSREVVCVD 390

  Fly   621 LPSNIIPDYGHNYRLVYNKIDN-------------------KKDAAEDVESSSEETESQEDETES 666
            ...:|:.|...|..|....:.|                   ..|.||...|.|......:..:..
Zfish   391 NLGDIVSDEECNMALRPQDLQNCDKGVCASSWFYSLWSERCSADCAEGSRSRSVVCLMSQSNSLP 455

  Fly   667 VEDQDEGTTSSEEQEDNKIEQSSAAGGAAAQ 697
            ::|.|:        ||...|......|..||
Zfish   456 LDDCDD--------EDKPDELMQCDLGPCAQ 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 44/246 (18%)
adamtsl7XP_017211532.2 ADAM_spacer1 82..183 CDD:310520 22/131 (17%)
TSP1 302..>335 CDD:214559 13/74 (18%)
TSP1 361..418 CDD:214559 11/56 (20%)
TSP1 542..593 CDD:214559
PLAC 601..631 CDD:312271
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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