DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sona and Adamts3

DIOPT Version :9

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_808540.2 Gene:Adamts3 / 330119 MGIID:3045353 Length:1204 Species:Mus musculus


Alignment Length:683 Identity:153/683 - (22%)
Similarity:245/683 - (35%) Gaps:213/683 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VLFTALLLVSSTICQGLPDLHKQM-TPEQLQSVFHVDTHDAVP-----HYELVQLQHHENNHNRR 64
            ::|.:|.|:::::.:.......|. |.|.:|    :|    :|     .||||            
Mouse     1 MVFLSLWLIAASLVEVRTSADGQAGTDEMVQ----ID----LPTKRYREYELV------------ 45

  Fly    65 RRSIGKGPKVNAALPPHHVKKDLSKNAYYSELKHEALASGGNHLFAPEVSAIKSHNVSFSAFGQH 129
                   ..|:..|..|::...||.|  :.:.....::|...|||         .||  :|||:.
Mouse    46 -------TPVSTNLKGHYLSHILSAN--HKKRSPRDVSSNSEHLF---------FNV--TAFGRD 90

  Fly   130 LNLSLRATQGLFKGAPHQLRMWTVGSEPNATHGLDLQEIVHEQHTSNDVGEVFQDEKNMAAILMR 194
            .:|.|:                     || ||.:....:|....|:...|.. .|.:|       
Mouse    91 FHLRLK---------------------PN-THFIAPGAVVEWHETAPRPGNT-TDPRN------- 125

  Fly   195 RHME-------------------TGDLI--------------MEGSIGHD---LVIKPLPHELSP 223
            .|:.                   .||::              :.|.|..|   ..|:||......
Mouse   126 SHLHGSASEGSWRSEPLQTSCAYVGDIMDIPGTSVAISNCDGLAGMIKSDDEEYFIEPLERGKQM 190

  Fly   224 NPEESH-HIIYKREASAAE---GQLSDFAFMEPDDLLASEKL--------ERLQRRQRRSRRSAP 276
            :.|... |::|||  ||.|   ..:|:..:....||...:.|        ::|.:..||.|.:..
Mouse   191 DEENGRIHVVYKR--SAVEQPPRDVSEDVYHRESDLEGLDDLGTVYSNIGQQLNKTMRRRRHTGE 253

  Fly   277 SSPDFEDLNDEDEGALDGEPQVAESRTRSRRQAPYIIYPEVLVIVDYDGYRLHGGDNLQVKRYFI 341
                    ||                        |.|  |||:.||....|.||.:::|  .|.:
Mouse   254 --------ND------------------------YNI--EVLLGVDDSVVRFHGKEHVQ--NYLL 282

  Fly   342 SFWNGV-DLRYRLLKGPRIRISIAGIIISRGRDATPYLERNRVGRDAIDSAAALTDMGKYLFRER 405
            :..|.| ::.:....|..|.:.:..:|:.....:...:||....|       :|.::.::..:::
Mouse   283 TLMNIVNEIYHDESLGVHINVVLVRMIMLGYAKSISLIERGNPSR-------SLENVCRWACQQQ 340

  Fly   406 RLPV-----YDIAVAITKLDMCRRTSAYGECNRGTAGFAYVGGACVVNKRLEKVNSVAIIEDTGG 465
            :...     :|.|:.:|:.|       :|..  |..|:|.|.|.|      ..|.|..:..: .|
Mouse   341 KTDPNHAEHHDHAIFLTRQD-------FGPA--GMQGYAPVTGMC------HPVRSCTLNHE-DG 389

  Fly   466 FSGIIVAAHEVGHLLGAVHDGSPPPSYLGGPGAQRCRWED--GYIMSDL-RHTERGFRWSACTVQ 527
            ||...|.|||.||:||..|||.          ..||..|.  |.:|:.| :.....:.||.|:.|
Mouse   390 FSSAFVVAHETGHVLGMEHDGQ----------GNRCGDETAMGSVMAPLVQAAFHRYHWSRCSGQ 444

  Fly   528 SFHHFLNGDTATCLHNAPHE-DSALGRSLPGTLLSLDAQCRRDRGT----YACFKDERVCAQLFC 587
            ....:::  :..||.:.|.| |......|||...|:|.|||.|.|.    ...|:....|.||:|
Mouse   445 ELKRYIH--SYDCLLDDPFEHDWPKLPELPGINYSMDEQCRFDFGVGYKMCTAFRTFDPCKQLWC 507

  Fly   588 FDAQTGY-CVAYR-PAAEGSACGNGYHCLDGRC 618
            ......| |...: |..:|:.|..|..|..|.|
Mouse   508 SHPDNPYFCKTKKGPPLDGTECAAGKWCYKGHC 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 58/237 (24%)
Adamts3NP_808540.2 Pep_M12B_propep 66..200 CDD:279848 31/174 (18%)
ZnMc_ADAMTS_like 256..457 CDD:239801 59/239 (25%)
Reprolysin 258..460 CDD:279729 59/240 (25%)
TSP1 554..605 CDD:214559
ADAM_spacer1 713..828 CDD:283607
TSP1 914..968 CDD:214559
TSP1 971..1016 CDD:214559
PLAC 1024..1052 CDD:285849
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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