DRSC/TRiP Functional Genomics Resources

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Protein Alignment sona and Adamts3

DIOPT Version :10

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_808540.2 Gene:Adamts3 / 330119 MGIID:3045353 Length:1204 Species:Mus musculus


Alignment Length:683 Identity:153/683 - (22%)
Similarity:245/683 - (35%) Gaps:213/683 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VLFTALLLVSSTICQGLPDLHKQM-TPEQLQSVFHVDTHDAVP-----HYELVQLQHHENNHNRR 64
            ::|.:|.|:::::.:.......|. |.|.:|    :|    :|     .||||            
Mouse     1 MVFLSLWLIAASLVEVRTSADGQAGTDEMVQ----ID----LPTKRYREYELV------------ 45

  Fly    65 RRSIGKGPKVNAALPPHHVKKDLSKNAYYSELKHEALASGGNHLFAPEVSAIKSHNVSFSAFGQH 129
                   ..|:..|..|::...||.|  :.:.....::|...|||         .||  :|||:.
Mouse    46 -------TPVSTNLKGHYLSHILSAN--HKKRSPRDVSSNSEHLF---------FNV--TAFGRD 90

  Fly   130 LNLSLRATQGLFKGAPHQLRMWTVGSEPNATHGLDLQEIVHEQHTSNDVGEVFQDEKNMAAILMR 194
            .:|.|:                     || ||.:....:|....|:...|.. .|.:|       
Mouse    91 FHLRLK---------------------PN-THFIAPGAVVEWHETAPRPGNT-TDPRN------- 125

  Fly   195 RHME-------------------TGDLI--------------MEGSIGHD---LVIKPLPHELSP 223
            .|:.                   .||::              :.|.|..|   ..|:||......
Mouse   126 SHLHGSASEGSWRSEPLQTSCAYVGDIMDIPGTSVAISNCDGLAGMIKSDDEEYFIEPLERGKQM 190

  Fly   224 NPEESH-HIIYKREASAAE---GQLSDFAFMEPDDLLASEKL--------ERLQRRQRRSRRSAP 276
            :.|... |::|||  ||.|   ..:|:..:....||...:.|        ::|.:..||.|.:..
Mouse   191 DEENGRIHVVYKR--SAVEQPPRDVSEDVYHRESDLEGLDDLGTVYSNIGQQLNKTMRRRRHTGE 253

  Fly   277 SSPDFEDLNDEDEGALDGEPQVAESRTRSRRQAPYIIYPEVLVIVDYDGYRLHGGDNLQVKRYFI 341
                    ||                        |.|  |||:.||....|.||.:::|  .|.:
Mouse   254 --------ND------------------------YNI--EVLLGVDDSVVRFHGKEHVQ--NYLL 282

  Fly   342 SFWNGV-DLRYRLLKGPRIRISIAGIIISRGRDATPYLERNRVGRDAIDSAAALTDMGKYLFRER 405
            :..|.| ::.:....|..|.:.:..:|:.....:...:||....|       :|.::.::..:::
Mouse   283 TLMNIVNEIYHDESLGVHINVVLVRMIMLGYAKSISLIERGNPSR-------SLENVCRWACQQQ 340

  Fly   406 RLPV-----YDIAVAITKLDMCRRTSAYGECNRGTAGFAYVGGACVVNKRLEKVNSVAIIEDTGG 465
            :...     :|.|:.:|:.|       :|..  |..|:|.|.|.|      ..|.|..:..: .|
Mouse   341 KTDPNHAEHHDHAIFLTRQD-------FGPA--GMQGYAPVTGMC------HPVRSCTLNHE-DG 389

  Fly   466 FSGIIVAAHEVGHLLGAVHDGSPPPSYLGGPGAQRCRWED--GYIMSDL-RHTERGFRWSACTVQ 527
            ||...|.|||.||:||..|||.          ..||..|.  |.:|:.| :.....:.||.|:.|
Mouse   390 FSSAFVVAHETGHVLGMEHDGQ----------GNRCGDETAMGSVMAPLVQAAFHRYHWSRCSGQ 444

  Fly   528 SFHHFLNGDTATCLHNAPHE-DSALGRSLPGTLLSLDAQCRRDRGT----YACFKDERVCAQLFC 587
            ....:::  :..||.:.|.| |......|||...|:|.|||.|.|.    ...|:....|.||:|
Mouse   445 ELKRYIH--SYDCLLDDPFEHDWPKLPELPGINYSMDEQCRFDFGVGYKMCTAFRTFDPCKQLWC 507

  Fly   588 FDAQTGY-CVAYR-PAAEGSACGNGYHCLDGRC 618
            ......| |...: |..:|:.|..|..|..|.|
Mouse   508 SHPDNPYFCKTKKGPPLDGTECAAGKWCYKGHC 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 58/237 (24%)
ADAMTS_CR_2 556..619 CDD:465496 23/69 (33%)
Adamts3NP_808540.2 Pep_M12B_propep 43..201 CDD:460254 40/219 (18%)
ZnMc_ADAMTS_like 256..457 CDD:239801 59/239 (25%)
ADAMTS_CR_2 472..540 CDD:465496 22/67 (33%)
TSP1 554..605 CDD:214559
ADAMTS_CR_3 611..712 CDD:437068
ADAMTS_spacer1 714..828 CDD:461796
TSP1_ADAMTS 850..905 CDD:465950
TSP1_ADAMTS 910..967 CDD:465950
TSP1_ADAMTS 971..1016 CDD:465950
PLAC 1024..1052 CDD:462560
Blue background indicates that the domain is not in the aligned region.

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