DRSC/TRiP Functional Genomics Resources

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Protein Alignment sona and Adamts20

DIOPT Version :9

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:XP_038936261.1 Gene:Adamts20 / 315263 RGDID:1307725 Length:1928 Species:Rattus norvegicus


Alignment Length:570 Identity:139/570 - (24%)
Similarity:232/570 - (40%) Gaps:122/570 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 KNAYYSELKHEALASGGNHLFAPEVSAIKSHNVSFSAFGQHLNLSLRATQGLFKGAPHQLRMWT- 152
            :|.::|..|.   :||     .||...:::| ...||:||...|:|.|..........::.:.| 
  Rat    57 QNRHFSRKKR---SSG-----VPEPPPLRTH-YRISAYGQLFQLNLSADSAFLAAGYTEVHLGTP 112

  Fly   153 -VGSEPNATHGLDLQEIVHEQHTSNDVGEVFQDEKNMAAILMRRHMETGDLI--MEGSIGHDLVI 214
             .|....:....||:...:.       |:|...|.::|...:     .|.|:  .:.:.| :..:
  Rat   113 VPGPGGRSAEPPDLRHCFYR-------GQVNAREDHIAVFSL-----CGGLMGTFKANDG-EYFL 164

  Fly   215 KPLPHELSPNPEESH---HIIYKREASAAEGQLSDFAFMEPDDLLASEKLERLQRRQRRSRRSAP 276
            :|:........|:.|   |:||::|             ::.:..:.|:........:.::.::|.
  Rat   165 EPVLKADGSEHEDDHNKPHLIYRQE-------------VKRNAFVRSQSHGPCGVSENQTEKTAL 216

  Fly   277 SSPDFE----DLNDEDEGALDG-EPQVAESRTRSRRQAPYIIYPEVLVIVDYDGYRLHGGDNLQV 336
            .||.|.    ||| ..:||:.| |.:.:...:||:|...|..|.||:|..|....| |.|.||| 
  Rat   217 PSPSFRNTTGDLN-RRKGAVFGLEGERSRLHSRSKRFLSYPRYVEVMVTADAKMVR-HHGQNLQ- 278

  Fly   337 KRYFISFWNGVDLRYRLLK-GPRIRISIAGIIISRGRDATPYLERNRVGRDAIDSAAALTDMGKY 400
             .|.::..:.|...|:... |..|.|.|..::|.......|.:..|           |.|.:..:
  Rat   279 -HYVLTLMSIVAAIYKDSSIGNLINIVIVKLVIIHSEQEGPVISFN-----------AATTLRNF 331

  Fly   401 LFRERRLPV--------YDIAVAITKLDMCRRTSAYGECNRGTAGFAYVGGACVVNKRLEKVNSV 457
            ...::...|        :|.||.||:.|:|   .|..:|:  |.|.|.:|..|      :...|.
  Rat   332 CLWQQSQNVLDDAHPSHHDTAVLITREDIC---GAKEKCD--TLGLAELGTLC------DPSRSC 385

  Fly   458 AIIEDTGGFSGIIVAAHEVGHLLGAVHDGSPPPSYLGGPGAQRCRWEDG-----YIMS-DLRHTE 516
            :|.|: .|.|.....|||:||:....||.|           .:|: |.|     ::|: .|.:..
  Rat   386 SISEE-NGLSAAFTIAHELGHVFNVPHDDS-----------FKCK-ESGTKHQYHVMAPTLNYHT 437

  Fly   517 RGFRWSACTVQSFHHFLNGDTATCLHNAPHEDSALGRS------LPGTLLSLDAQCRR--DRGTY 573
            ..:.||||:.:....||:.....||.:.|:     ||:      |||::...:.||..  ..|:.
  Rat   438 SPWTWSACSQKHITEFLDTGHGECLLDKPN-----GRTYDLSPQLPGSVYDGNKQCELMFGPGSQ 497

  Fly   574 AC--FKDERVCAQLFCFDAQ---TGYCVAYRPAAEGSACGNGYHCLDGRC 618
            .|  .|.   |.:|:|..|:   .|....:.|.|:|::||.|.||..|.|
  Rat   498 VCPYLKQ---CRRLWCTSAEGVHKGCRTQHMPLADGTSCGPGMHCHRGLC 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 63/243 (26%)
Adamts20XP_038936261.1 Pep_M12B_propep 41..186 CDD:396235 30/150 (20%)
ZnMc_ADAMTS_like 257..463 CDD:239801 63/243 (26%)
ADAM_CR_2 478..545 CDD:407643 22/70 (31%)
TSP1 558..610 CDD:214559
ADAM_spacer1 720..838 CDD:368694
TSP1_ADAMTS 906..959 CDD:408800
TSP1_ADAMTS 968..1020 CDD:408800
TSP1_ADAMTS 1023..1075 CDD:408800
TSP1_ADAMTS 1078..1132 CDD:408800
TSP1_ADAMTS 1154..1206 CDD:408800
TSP1_ADAMTS 1209..1261 CDD:408800
TSP1_ADAMTS 1306..1357 CDD:408800
TSP1_ADAMTS 1360..1412 CDD:408800
TSP1_ADAMTS 1418..1471 CDD:408800
TSP1_ADAMTS 1474..1527 CDD:408800
TSP1_ADAMTS 1532..1585 CDD:408800
TSP1_ADAMTS 1657..1708 CDD:408800
GON 1713..1880 CDD:400843
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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