DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sona and Adamts9

DIOPT Version :10

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_001416065.1 Gene:Adamts9 / 312566 RGDID:1306889 Length:1932 Species:Rattus norvegicus


Alignment Length:680 Identity:161/680 - (23%)
Similarity:254/680 - (37%) Gaps:166/680 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LVLFTALLLVSSTICQGLPDLHKQMTPEQLQSVFHVDTH-------DAVPHYELVQ--------L 54
            ||.:..||.:.      :|||.:..:|:...:|.....|       :::..||:..        .
  Rat     3 LVSWATLLTLL------VPDLVEMRSPDSAAAVRKDRLHPRQVKLLESLSEYEIASPIRVNPLGE 61

  Fly    55 QHHENNH-NRRRRSIGKGPKVNAALPPHHVKKDLSKNAYYSELKHEALASGGNHLFAPEVSAIKS 118
            ....|.| .||||||      |:|..|.......|.::..|..:|..|                 
  Rat    62 PFPTNVHFKRRRRSI------NSASDPWPAFASSSSSSSTSSQEHYRL----------------- 103

  Fly   119 HNVSFSAFGQHLNLSLRATQGLFKGAPHQLRMWTVGSEPNATHGLDLQEIVHEQHTSNDVGEVFQ 183
                 .||||....:|.|..|..  ||  |...|:..||    |::..::..|            
  Rat   104 -----KAFGQQFLFNLTAHTGFI--AP--LFTVTLLGEP----GVNQSKLYSE------------ 143

  Fly   184 DEKNMAAILMRRHMETGD------LIMEGSIG----H--DLVIKPLPHELSPNPEESH------H 230
            :|..:.....:.|:.|..      .:..|.:|    |  |..|:||   ||.:.:|..      |
  Rat   144 EEMELRHCFYKGHVNTKSEHTAVISLCSGMMGTFRSHDGDYFIEPL---LSVDEQEDEEEQNKPH 205

  Fly   231 IIYKREASAAEGQLSDFAFMEPDDLLASEKLERLQRRQRRSRRSAPSSPD------------FED 283
            :||:|.....|......| .:..:|..|...::.:.|.|:.|:....:.|            |..
  Rat   206 VIYRRNNPQREPSTGKHA-CDTSELKNSYSKDKRKTRLRKRRKRNSLADDVAALKRGMATKAFSG 269

  Fly   284 LNDEDEGALDGEPQVAESRTRSRRQAPYIIYP---EVLVIVDYDGYRLHGGDNLQVKRYFISFWN 345
            .|:...|..|        |...:|...::.||   ||:|:.|:.....| |.|||  .|.::..:
  Rat   270 YNNRTNGTRD--------RRNHKRTKRFLSYPRFVEVMVVADHRMVLYH-GSNLQ--HYILTLMS 323

  Fly   346 GVDLRYRLLK-GPRIRISIAGIIISRGRDATPYLERNRVGRDAIDSAAALTDMGKYLFRERRLP- 408
            .|...|:... |..|.|.|..:::.......|.:..|        :...|.:..::...:..|. 
  Rat   324 IVASIYKDSSIGNLINIVIVNLVVIHNEQEGPSINFN--------AQTTLKNFCQWQHSKNHLGG 380

  Fly   409 -VYDIAVAITKLDMCRRTSAYGECNRGTAGFAYVGGACVVNKRLEKVNSVAIIEDTGGFSGIIVA 472
             .:|.||.:|:.|:||   |..:|:  |.|.|.:|..|      :...|.:|.||: |.|.....
  Rat   381 IQHDTAVLVTREDICR---AQDKCD--TLGLAELGTIC------DPYRSCSISEDS-GLSTAFTI 433

  Fly   473 AHEVGHLLGAVHDGSPPPSYLGGPGAQRCRWEDG-----YIMS-DLRHTERGFRWSACTVQSFHH 531
            |||:||:....||.|           .:|: |:|     ::|: .|......:.||.|:.:....
  Rat   434 AHELGHVFNMPHDDS-----------NKCK-EEGVKSPQHVMAPTLNFYTNPWMWSKCSRKYITE 486

  Fly   532 FLNGDTATCLHNAPHEDS-ALGRSLPGTLLSLDAQCRR--DRGTYACFKDERVCAQLFCFD---A 590
            ||:.....||.|.|...: .|...|||.|.:::.||..  ..|:..| .....|.:|:|.:   |
  Rat   487 FLDTGYGECLLNEPQSRTYPLPSQLPGLLYNVNKQCELIFGPGSQVC-PYMMQCRRLWCNNVDGA 550

  Fly   591 QTGYCVAYRPAAEGSACGNGYHCLDGRCTP 620
            ..|....:.|.|:|:.|..|.||..|.|.|
  Rat   551 HKGCRTQHTPWADGTECEPGKHCKFGFCVP 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 61/240 (25%)
ADAMTS_CR_2 556..619 CDD:465496 20/67 (30%)
Adamts9NP_001416065.1 None

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