DRSC/TRiP Functional Genomics Resources

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Protein Alignment sona and Adamts16

DIOPT Version :9

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_001358944.1 Gene:Adamts16 / 306664 RGDID:1310046 Length:1221 Species:Rattus norvegicus


Alignment Length:650 Identity:175/650 - (26%)
Similarity:244/650 - (37%) Gaps:174/650 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LQSVFHVDTHDAVPHYELVQLQHHENNHNRRRRSI--GKGPKVNAAL--PPHHVKKDLSKNAYYS 94
            |.|.:.||.......|:::   ||:   .||||::  .||..::..|  |.|.:..||       
  Rat    58 LVSAYEVDHSGDYVSYDIM---HHQ---RRRRRAVTQSKGDALHLRLKGPRHDLHLDL------- 109

  Fly    95 ELKHEALASGGNHLFAPEVSAIKSHNVSFSAFGQHLNLSLRATQGLFKGAPHQLRMWTVGSEPNA 159
                    ...::|.||..                      ..|.|.||....::|:.  :|.|.
  Rat   110 --------KAASNLMAPGF----------------------MVQTLGKGGTKSVQMFP--AEENC 142

  Fly   160 THGLDLQEIVHEQHTSNDVGEVFQDEKNMAAILMRRHMETGDLIMEGSIGHDLVIKPLPHELSPN 224
            .:    |..:..|..|:......|....|        :.|.|.        |..:||||.:|:..
  Rat   143 FY----QGSLRSQGNSSVALSTCQGLLGM--------IRTKDA--------DYFLKPLPPQLTSK 187

  Fly   225 PEES------HHIIYKREASAAEGQLSDFAFMEPDDLLASEK--LER-----------LQRRQR- 269
            ...|      .||:|||   :.|.|    |..|.:.|:.:.|  |.|           |.|:|. 
  Rat   188 LNRSAQGGSPSHILYKR---STEHQ----APRENEVLMITRKRDLARTHLHHDNFHLGLSRKQHF 245

  Fly   270 --RSRRSAPSSPDFEDLNDEDEGALDGEPQVAESRTRSRRQAPYIIYPEVLVIVDYDGYRLHGGD 332
              |.::..|..||.......||......|:  .|..:|.|.....:  |.||:||....:.||.:
  Rat   246 CGRRKKYMPQPPDDNLYILPDEYKPSSRPK--RSLLKSHRNEELNV--ETLVVVDRKMLQSHGHE 306

  Fly   333 NLQVKRYFISFWNGVDLRYRLLK----GPRIRISIAGIIISRGRDATPYLERNRVGRDAIDSAA- 392
            |  :..|.::..|.|.   .|.|    |..|.|.|.|:|:         ||..:.|. ||...| 
  Rat   307 N--ITTYVLTILNMVS---ALFKDGTIGGNINIVIVGLIL---------LEDEQPGL-AISHHAD 356

  Fly   393 -ALTD--------MGKYLFRERRLPVYDIAVAITKLDMCRRTSAYGECNRGTAGFAYVGGACVVN 448
             .||.        |||...|      :|.|:.:|.||:|...:.  .|:  |.|||.:.|.|   
  Rat   357 RTLTSFCQWQSGLMGKDGAR------HDHAILLTGLDICSWKNE--PCD--TLGFAPISGMC--- 408

  Fly   449 KRLEKVNSVAIIEDTG-GFSGIIVAAHEVGHLLGAVHDGSPPPSYLGGPGAQRCRWEDGYIMSDL 512
               .|..|..:.||:| |.:..|  |||.||..|.||||.          ...|:..:|.|||..
  Rat   409 ---SKYRSCTVNEDSGLGLAFTI--AHESGHNFGMVHDGE----------GNMCKKSEGNIMSPT 458

  Fly   513 RHTERG-FRWSACTVQSFHHFLNGDTATCLHNAPH--EDSALGRSLPGTLLSLDAQCRRDRGTYA 574
            .....| |.||:|:.|..|.||:...|.||.:.|.  ::......|||.|...:.||:...|..|
  Rat   459 LAGRNGVFSWSSCSRQYLHKFLSTAQAICLADQPKPVKEYKYPEKLPGQLYDANTQCKWQFGEKA 523

  Fly   575 --CFKDER--VCAQLFCFDAQTGYCVAYRPAAEGSACGNGYHCLDGRCTPL----PSNIIPDYGH 631
              |..|.|  :|..|:|..........:.|||||:.||....|..|:|...    |.   |.:||
  Rat   524 KLCMLDFRKDICKALWCHRIGRKCETKFMPAAEGTLCGQDMWCRGGQCVKYGDEGPK---PTHGH 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 77/244 (32%)
Adamts16NP_001358944.1 Pep_M12B_propep 57..202 CDD:366707 44/208 (21%)
ZnMc_ADAMTS_like 287..488 CDD:239801 76/245 (31%)
ADAM_CR_2 505..572 CDD:375321 22/66 (33%)
TSP1 586..638 CDD:214559 174/649 (27%)
ADAM_spacer1 745..855 CDD:368694
TSP1 928..984 CDD:214559
TSP1 987..>1016 CDD:214559
TSP1 1055..1112 CDD:214559
TSP1 1125..1178 CDD:214559
PLAC 1187..1217 CDD:370061
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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