DRSC/TRiP Functional Genomics Resources

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Protein Alignment sona and Adamts17

DIOPT Version :10

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_001419066.1 Gene:Adamts17 / 293004 RGDID:1308783 Length:1122 Species:Rattus norvegicus


Alignment Length:615 Identity:145/615 - (23%)
Similarity:211/615 - (34%) Gaps:184/615 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 ASGGNHLFAPEVSAIKSHNVSFSAFGQHLNLSLRATQGLFKGAPHQLRMWTVGSEPNATHGLDLQ 166
            ||.|:....|...|:..|   ..|||:.|.|.||          ..||..:.|.|          
  Rat    66 ASPGDPRAGPGERALLLH---LPAFGRDLYLQLR----------RDLRFLSPGFE---------- 107

  Fly   167 EIVHEQHTSNDVGE----VFQDEKNMAAILMRRHMETGDLIMEGSIG------------HDLV-I 214
              |.|...|...|.    .|...:.:.        ..|.|:...:.|            .:|| |
  Rat   108 --VEEAGVSGRSGHPAELCFYSGQVLG--------HPGSLVSLSACGAAGGLVGLIQLEQELVFI 162

  Fly   215 KPLPHELSPNPEESHHIIYKREASAAEGQLSDFAFMEPDDLLASEKLERLQRRQRRSRRSAPSSP 279
            :||.:...|.....|  :.:|:.|:..|             ||: |:|..::..:......|.  
  Rat   163 QPLNNSGGPFSRREH--LIRRKWSSTSG-------------LAT-KVEGPRQHCKVVTEEKPR-- 209

  Fly   280 DFEDLNDEDEGALDGEPQVAESRTRSRRQAPYIIYP---EVLVIVDYDGYRLHGGDNLQVKRYFI 341
                     :|.|..:       .|.||.|..:...   |.||:.|.|..:.||.:..|  |:.:
  Rat   210 ---------KGKLSWD-------WRERRNAIRLTNEHTVETLVVADADMVQYHGAEAAQ--RFIL 256

  Fly   342 SFWNGVDLRYRLLK----GPRIRISIAGIIISRGRDA-------------------------TPY 377
            :..|.|   |.:.:    |.:|.|.:..:::.|.|.|                         ..|
  Rat   257 TVMNMV---YNMFQHQSLGIKINIQVTKLVLLRQRPAKLSIGHHGERSLESFCHWQNEEYGGARY 318

  Fly   378 LERNRV--GRDAIDSAAALTDMGKYLFRERRLPVYDIAVAITKLDMCRRTSAYGECNRGTAGFAY 440
            |..|:|  |:|  |:                 |..|.||.:|:.|.|.....  .|:  |.|.||
  Rat   319 LGNNQVPGGKD--DT-----------------PPVDAAVFVTRTDFCVHKDE--PCD--TVGIAY 360

  Fly   441 VGGACVVNKRLEKVNSVAIIEDTGGFSGIIVAAHEVGHLLGAVHDGSPPPSYLGGPGAQRCRWED 505
            :||.|...::       .::.:..|.:.....|||:||.||..|| ....|..|........|..
  Rat   361 LGGVCSAKRK-------CVLAEDNGLNLAFTIAHELGHNLGMNHD-DDHSSCAGRSHIMSGEWVK 417

  Fly   506 GYIMSDLRHTERGFRWSACTVQSFHHFLNGDTATC-LHNAPHEDSA--LGRSLPGTLLSLDAQCR 567
            |...|||       .||:|:.....:||....:|| |...|....|  |...|||...|.:.||:
  Rat   418 GRNPSDL-------SWSSCSRDDLENFLKSKVSTCLLITDPRSQHALRLPHKLPGMHYSANEQCQ 475

  Fly   568 RDRGTYACF---KDERVCAQLFCF-DAQTGYCVAYRPAAEGSACGNGYHCLDGRC---TPLPSNI 625
            ...||.|.|   .:..:||.|:|. :..|.......|..:|:.||....|..|.|   ||:|.::
  Rat   476 ILFGTNATFCKNMEHLMCAGLWCLVEGDTSCKTKLDPPLDGTECGADKWCRAGECVSKTPIPEHV 540

  Fly   626 IPDY-------------GHNYRLVYNKIDN 642
            ..|:             |...|....|.||
  Rat   541 DGDWSPWSAWSMCSRTCGTGARFRQRKCDN 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 64/263 (24%)
ADAMTS_CR_2 556..619 CDD:465496 21/69 (30%)
Adamts17NP_001419066.1 Pep_M12B_propep 35..179 CDD:460254 32/147 (22%)
ZnMc_ADAMTS_like 230..447 CDD:239801 64/259 (25%)
ADAMTS_CR_2 464..531 CDD:465496 20/66 (30%)
TSP1 544..596 CDD:214559 5/27 (19%)
ADAMTS_CR_3 <628..697 CDD:437068
ADAMTS_spacer1 699..808 CDD:461796
TSP1_ADAMTS 834..886 CDD:465950
TSP1_ADAMTS 890..946 CDD:465950
TSP1_ADAMTS 950..992 CDD:465950
TSP1_ADAMTS 1001..1053 CDD:465950
Blue background indicates that the domain is not in the aligned region.

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