DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sona and Adamts17

DIOPT Version :9

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:XP_218753.6 Gene:Adamts17 / 293004 RGDID:1308783 Length:1122 Species:Rattus norvegicus


Alignment Length:615 Identity:145/615 - (23%)
Similarity:211/615 - (34%) Gaps:184/615 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 ASGGNHLFAPEVSAIKSHNVSFSAFGQHLNLSLRATQGLFKGAPHQLRMWTVGSEPNATHGLDLQ 166
            ||.|:....|...|:..|   ..|||:.|.|.||          ..||..:.|.|          
  Rat    66 ASPGDPRAGPGERALLLH---LPAFGRDLYLQLR----------RDLRFLSPGFE---------- 107

  Fly   167 EIVHEQHTSNDVGE----VFQDEKNMAAILMRRHMETGDLIMEGSIG------------HDLV-I 214
              |.|...|...|.    .|...:.:.        ..|.|:...:.|            .:|| |
  Rat   108 --VEEAGVSGRSGHPAELCFYSGQVLG--------HPGSLVSLSACGAAGGLVGLIQLEQELVFI 162

  Fly   215 KPLPHELSPNPEESHHIIYKREASAAEGQLSDFAFMEPDDLLASEKLERLQRRQRRSRRSAPSSP 279
            :||.:...|.....|  :.:|:.|:..|             ||: |:|..::..:......|.  
  Rat   163 QPLNNSGGPFSRREH--LIRRKWSSTSG-------------LAT-KVEGPRQHCKVVTEEKPR-- 209

  Fly   280 DFEDLNDEDEGALDGEPQVAESRTRSRRQAPYIIYP---EVLVIVDYDGYRLHGGDNLQVKRYFI 341
                     :|.|..:       .|.||.|..:...   |.||:.|.|..:.||.:..|  |:.:
  Rat   210 ---------KGKLSWD-------WRERRNAIRLTNEHTVETLVVADADMVQYHGAEAAQ--RFIL 256

  Fly   342 SFWNGVDLRYRLLK----GPRIRISIAGIIISRGRDA-------------------------TPY 377
            :..|.|   |.:.:    |.:|.|.:..:::.|.|.|                         ..|
  Rat   257 TVMNMV---YNMFQHQSLGIKINIQVTKLVLLRQRPAKLSIGHHGERSLESFCHWQNEEYGGARY 318

  Fly   378 LERNRV--GRDAIDSAAALTDMGKYLFRERRLPVYDIAVAITKLDMCRRTSAYGECNRGTAGFAY 440
            |..|:|  |:|  |:                 |..|.||.:|:.|.|.....  .|:  |.|.||
  Rat   319 LGNNQVPGGKD--DT-----------------PPVDAAVFVTRTDFCVHKDE--PCD--TVGIAY 360

  Fly   441 VGGACVVNKRLEKVNSVAIIEDTGGFSGIIVAAHEVGHLLGAVHDGSPPPSYLGGPGAQRCRWED 505
            :||.|...::       .::.:..|.:.....|||:||.||..|| ....|..|........|..
  Rat   361 LGGVCSAKRK-------CVLAEDNGLNLAFTIAHELGHNLGMNHD-DDHSSCAGRSHIMSGEWVK 417

  Fly   506 GYIMSDLRHTERGFRWSACTVQSFHHFLNGDTATC-LHNAPHEDSA--LGRSLPGTLLSLDAQCR 567
            |...|||       .||:|:.....:||....:|| |...|....|  |...|||...|.:.||:
  Rat   418 GRNPSDL-------SWSSCSRDDLENFLKSKVSTCLLITDPRSQHALRLPHKLPGMHYSANEQCQ 475

  Fly   568 RDRGTYACF---KDERVCAQLFCF-DAQTGYCVAYRPAAEGSACGNGYHCLDGRC---TPLPSNI 625
            ...||.|.|   .:..:||.|:|. :..|.......|..:|:.||....|..|.|   ||:|.::
  Rat   476 ILFGTNATFCKNMEHLMCAGLWCLVEGDTSCKTKLDPPLDGTECGADKWCRAGECVSKTPIPEHV 540

  Fly   626 IPDY-------------GHNYRLVYNKIDN 642
            ..|:             |...|....|.||
  Rat   541 DGDWSPWSAWSMCSRTCGTGARFRQRKCDN 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 64/263 (24%)
Adamts17XP_218753.6 Pep_M12B_propep 61..179 CDD:279848 32/147 (22%)
AANH_like 168..>244 CDD:294206 21/109 (19%)
Reprolysin 230..447 CDD:279729 64/259 (25%)
ZnMc_ADAMTS_like 230..447 CDD:239801 64/259 (25%)
TSP1 544..596 CDD:214559 5/27 (19%)
ADAM_spacer1 698..808 CDD:283607
TSP_1 893..946 CDD:278517
TSP1 950..>981 CDD:214559
TSP1 1001..1053 CDD:214559
PLAC 1080..1106 CDD:285849
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.