DRSC/TRiP Functional Genomics Resources

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Protein Alignment sona and Adamtsl3

DIOPT Version :9

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_001177303.1 Gene:Adamtsl3 / 269959 MGIID:3028499 Length:1706 Species:Mus musculus


Alignment Length:149 Identity:38/149 - (25%)
Similarity:44/149 - (29%) Gaps:63/149 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   496 PGAQ---RCRWEDGYIMSDLRHTERGFRWSACTVQSFHHFLNGDTATCLHNAPHED------SAL 551
            ||.|   ||          :.|..|         ...||      ..|.||:...|      .|.
Mouse  1565 PGNQCPGRC----------MGHATR---------MQHHH------TACSHNSSSSDCEDGRRPAF 1604

  Fly   552 GRSLPGTLLSLDAQCRRDRGTYACFKDERVCAQLF------------CFDAQTGYCVAYRPAAEG 604
            ||:.  ||...:| |.|......|   ..||.:.|            |......|||..:|||  
Mouse  1605 GRNC--TLGPCEA-CWRVGPWKPC---TAVCGRGFQSRKVDCIHTGSCKIVADRYCVQVKPAA-- 1661

  Fly   605 SACGNGYHCL----DGRCT 619
                 ..|||    |..||
Mouse  1662 -----WRHCLGPSCDRNCT 1675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 10/48 (21%)
Adamtsl3NP_001177303.1 TSP1 90..136 CDD:214559
TSP1 438..492 CDD:214559
TSP1 498..>527 CDD:214559
TSP1 583..>603 CDD:214559
TSP1 720..773 CDD:214559
TSP1 776..833 CDD:214559
TSP1 839..894 CDD:214559
Ig 942..1006 CDD:299845
Ig 1234..1293 CDD:299845
IG_like 1321..1393 CDD:214653
IGc2 1330..1388 CDD:197706
TSP_1 1503..1558 CDD:301595
PLAC 1674..1704 CDD:285849 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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