DRSC/TRiP Functional Genomics Resources

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Protein Alignment sona and Adamts5

DIOPT Version :9

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_035912.2 Gene:Adamts5 / 23794 MGIID:1346321 Length:930 Species:Mus musculus


Alignment Length:407 Identity:104/407 - (25%)
Similarity:160/407 - (39%) Gaps:65/407 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 IYKREASAAEGQLSDFAFMEPDDLLASEKLERLQRRQRRSRRSAPSSPDFEDLNDEDEGALDGEP 296
            :|.||..:.|......:...|......::...:..|.||....||...|....:......    |
Mouse   192 VYNREGFSFEALPPRASCETPASPSGPQESPSVHSRSRRRSALAPQLLDHSAFSPSGNAG----P 252

  Fly   297 QV-AESRTRSRRQAPYIIYPEVLVIVDYDGYRLHGGDNLQVKRYFISFWNGVDLRYRLLKGP--- 357
            |. ...|.||..:|..:   |:|::.|....|::|..   ::.|.::.   ..:..||....   
Mouse   253 QTWWRRRRRSISRARQV---ELLLVADSSMARMYGRG---LQHYLLTL---ASIANRLYSHASIE 308

  Fly   358 -RIRISIAGIIISRGRDATPYLERNRVGRDAIDSAAALTDMGKYLFRERRL-----PVYDIAVAI 416
             .||:::..:::...:|.:..:.:|        :|..|.:..|:..:..:|     ..||.|:..
Mouse   309 NHIRLAVVKVVVLTDKDTSLEVSKN--------AATTLKNFCKWQHQHNQLGDDHEEHYDAAILF 365

  Fly   417 TKLDMCRRTSAYGECNRGTAGFAYVGGACVVNKRLEKVNSVAIIEDTGGFSGIIVAAHEVGHLLG 481
            |:.|:|    .:..|:  |.|.|.||..|...:      |.|:|||.|..:...| |||:|||||
Mouse   366 TREDLC----GHHSCD--TLGMADVGTICSPER------SCAVIEDDGLHAAFTV-AHEIGHLLG 417

  Fly   482 AVHDGSPPPSYLGGPGAQRCR-----WEDGYIMSD-LRHTERGFRWSACTVQSFHHFLNGDTATC 540
            ..||.|           :.|.     .||..:||. |...:....||.||..:...||:.....|
Mouse   418 LSHDDS-----------KFCEENFGTTEDKRLMSSILTSIDASKPWSKCTSATITEFLDDGHGNC 471

  Fly   541 LHNAPHEDSALGRSLPGTLLSLDAQCRRDRG-TYACFKDERVCAQLFCFDAQTGYCVAYR---PA 601
            |.:.|.:.......|||.......||....| .|:......|||:|:|...:.|..|...   ||
Mouse   472 LLDLPRKQILGPEELPGQTYDATQQCNLTFGPEYSVCPGMDVCARLWCAVVRQGQMVCLTKKLPA 536

  Fly   602 AEGSACGNGYHCLDGRC 618
            .||:.||.|..||.|:|
Mouse   537 VEGTPCGKGRVCLQGKC 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 60/243 (25%)
Adamts5NP_035912.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..68
Pep_M12B_propep 68..174 CDD:279848
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..231 3/23 (13%)
Cysteine switch. /evidence=ECO:0000250 207..214 1/6 (17%)
Reprolysin 269..476 CDD:279729 61/247 (25%)
ZnMc_ADAMTS_like 269..473 CDD:239801 60/244 (25%)
ADAM_CR 486..556 CDD:301627 25/68 (37%)
TSP1 570..622 CDD:214559
Spacer 732..874
ADAM_spacer1 732..852 CDD:283607
TSP1 879..930 CDD:214559
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6268
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

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