DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sona and Thsd7b

DIOPT Version :9

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:XP_011246266.1 Gene:Thsd7b / 210417 MGIID:2443925 Length:1609 Species:Mus musculus


Alignment Length:553 Identity:91/553 - (16%)
Similarity:149/553 - (26%) Gaps:212/553 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 EPQVAESRTRSRRQAPYIIYPEVLVIVDYDGYRLHGGDNLQVK-----------RYFISFWNGVD 348
            :|...:.|||      :::.|.:       ..|..|.|: ||:           :|.::.|:...
Mouse  1147 DPHAMQRRTR------HLLRPSL-------NSRTCGEDS-QVRPCLLNENCFQFQYNLTEWSTCQ 1197

  Fly   349 LRYRLLKGPRIRISIAGIIISRGRDAT-PYLERNRVGRDAIDSAAALTD---------------- 396
            |...:..|..:|..:...:.|.|:..: .:.|:..:.:....|...|.:                
Mouse  1198 LSENVSCGQGVRTRLLSCVRSDGKSVSMDHCEQRNLEKPQRMSIPCLVECVVNCQLSGWTTWTEC 1262

  Fly   397 -----MGKYLFRER--RLPVY----DIAVAITKLDMCRRTSAY--------------GECNRGTA 436
                 .|..:.|.|  .:|..    .....:|:...|..|..|              |:|..|. 
Mouse  1263 SQTCGQGGRMSRTRFIIMPTQGEGRQCPTELTQQKPCPVTPCYSWVLGNWSACKLEGGDCGEGV- 1326

  Fly   437 GFAYVGGACVVNKRLEKVNSVAIIEDTGGFSGIIVAAHEVGHLLGAVHDGSPPPSYLGGPGAQRC 501
                            :|.|.:.:...|..|...|...|.  |.|.|       .:..|...|.|
Mouse  1327 ----------------QVRSFSCVVHNGSISHTAVPVEEA--LCGEV-------PFQEGILKQLC 1366

  Fly   502 R-----------WEDGYIMSDLRHTERGFRWSACTVQSFHHFLNGDTATCLHNAPHEDSA-LGRS 554
            .           |.:               ||.|.:            ||:.....|.:. ..||
Mouse  1367 SVPCPGDCHITPWSE---------------WSKCEL------------TCIDGRSFETTGRQSRS 1404

  Fly   555 LPGTLLSLDAQ------------------------------------CRRDRG---TYACFKDER 580
            ....:.|.:.|                                    |:|..|   |..|....|
Mouse  1405 RTFIIQSFENQDSCPQQVLETRPCTGGKCYHYIWKASLWNNNERTVWCQRSDGLNVTGGCSPQAR 1469

  Fly   581 VCAQLFCFDA---QTGYCVAYRPAAEGSACGNGYHCLDGRCTPLPSNIIPDYGHNYRLVYNKIDN 642
            ..|...|..|   ...||      .:|..||    |..|....:.|:...||       ..|:..
Mouse  1470 PAAIRQCIPACKKPFSYC------TQGGVCG----CEKGYTEIMRSSGFLDY-------CMKVPG 1517

  Fly   643 KKDAAEDVESSSEETESQEDETESVEDQDEGTTSSEEQEDNKIEQ--SSAAGGAAAQSTTTARST 705
            .:|...||::.|.:......:   :.|..:|.:......|.:::.  ...:||          |.
Mouse  1518 SEDKKADVKNLSGKNRPVNSK---IHDIFKGWSLQPLDPDGRVKMWVYGVSGG----------SF 1569

  Fly   706 TTTTVRTTSTTTTTAKPKSKSFGYLHRSLPERQ 738
            ........::.....|||.      |:|.|..|
Mouse  1570 LIMIFLVFTSYLVCKKPKP------HQSTPRHQ 1596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 45/292 (15%)
Thsd7bXP_011246266.1 TSP1_ADAMTS 44..95 CDD:408800
TSP1_ADAMTS <137..176 CDD:408800
TSP1_spondin 180..229 CDD:408798
TSP1_spondin 337..398 CDD:408798
TSP1_spondin 602..660 CDD:408798
TSP1_ADAMTS 665..734 CDD:408800
TSP1_spondin 738..789 CDD:408798
TSP1_ADAMTS 1065..1125 CDD:408800
TSP1_spondin 1131..1177 CDD:408798 10/43 (23%)
TSP1_spondin 1251..1304 CDD:408798 7/52 (13%)
TSP1_spondin 1374..1433 CDD:408798 11/85 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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