DRSC/TRiP Functional Genomics Resources

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Protein Alignment sona and Thsd7b

DIOPT Version :10

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:XP_011246266.1 Gene:Thsd7b / 210417 MGIID:2443925 Length:1609 Species:Mus musculus


Alignment Length:553 Identity:91/553 - (16%)
Similarity:149/553 - (26%) Gaps:212/553 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 EPQVAESRTRSRRQAPYIIYPEVLVIVDYDGYRLHGGDNLQVK-----------RYFISFWNGVD 348
            :|...:.|||      :::.|.:       ..|..|.|: ||:           :|.::.|:...
Mouse  1147 DPHAMQRRTR------HLLRPSL-------NSRTCGEDS-QVRPCLLNENCFQFQYNLTEWSTCQ 1197

  Fly   349 LRYRLLKGPRIRISIAGIIISRGRDAT-PYLERNRVGRDAIDSAAALTD---------------- 396
            |...:..|..:|..:...:.|.|:..: .:.|:..:.:....|...|.:                
Mouse  1198 LSENVSCGQGVRTRLLSCVRSDGKSVSMDHCEQRNLEKPQRMSIPCLVECVVNCQLSGWTTWTEC 1262

  Fly   397 -----MGKYLFRER--RLPVY----DIAVAITKLDMCRRTSAY--------------GECNRGTA 436
                 .|..:.|.|  .:|..    .....:|:...|..|..|              |:|..|. 
Mouse  1263 SQTCGQGGRMSRTRFIIMPTQGEGRQCPTELTQQKPCPVTPCYSWVLGNWSACKLEGGDCGEGV- 1326

  Fly   437 GFAYVGGACVVNKRLEKVNSVAIIEDTGGFSGIIVAAHEVGHLLGAVHDGSPPPSYLGGPGAQRC 501
                            :|.|.:.:...|..|...|...|.  |.|.|       .:..|...|.|
Mouse  1327 ----------------QVRSFSCVVHNGSISHTAVPVEEA--LCGEV-------PFQEGILKQLC 1366

  Fly   502 R-----------WEDGYIMSDLRHTERGFRWSACTVQSFHHFLNGDTATCLHNAPHEDSA-LGRS 554
            .           |.:               ||.|.:            ||:.....|.:. ..||
Mouse  1367 SVPCPGDCHITPWSE---------------WSKCEL------------TCIDGRSFETTGRQSRS 1404

  Fly   555 LPGTLLSLDAQ------------------------------------CRRDRG---TYACFKDER 580
            ....:.|.:.|                                    |:|..|   |..|....|
Mouse  1405 RTFIIQSFENQDSCPQQVLETRPCTGGKCYHYIWKASLWNNNERTVWCQRSDGLNVTGGCSPQAR 1469

  Fly   581 VCAQLFCFDA---QTGYCVAYRPAAEGSACGNGYHCLDGRCTPLPSNIIPDYGHNYRLVYNKIDN 642
            ..|...|..|   ...||      .:|..||    |..|....:.|:...||       ..|:..
Mouse  1470 PAAIRQCIPACKKPFSYC------TQGGVCG----CEKGYTEIMRSSGFLDY-------CMKVPG 1517

  Fly   643 KKDAAEDVESSSEETESQEDETESVEDQDEGTTSSEEQEDNKIEQ--SSAAGGAAAQSTTTARST 705
            .:|...||::.|.:......:   :.|..:|.:......|.:::.  ...:||          |.
Mouse  1518 SEDKKADVKNLSGKNRPVNSK---IHDIFKGWSLQPLDPDGRVKMWVYGVSGG----------SF 1569

  Fly   706 TTTTVRTTSTTTTTAKPKSKSFGYLHRSLPERQ 738
            ........::.....|||.      |:|.|..|
Mouse  1570 LIMIFLVFTSYLVCKKPKP------HQSTPRHQ 1596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 45/292 (15%)
ADAMTS_CR_2 556..619 CDD:465496 18/104 (17%)
Thsd7bXP_011246266.1 TSP1_ADAMTS 44..95 CDD:465950
TSP1_spondin 180..229 CDD:465948
TSP1_spondin 337..398 CDD:465948
TSP1_spondin 485..542 CDD:480609
TSP1_spondin 602..660 CDD:465948
TSP1_ADAMTS 665..733 CDD:465950
TSP1_spondin 738..789 CDD:465948
TSP1_ADAMTS 1065..1125 CDD:465950
TSP1_spondin 1131..1177 CDD:480609 10/43 (23%)
TSP1_spondin 1251..1304 CDD:465948 7/52 (13%)
TSP1_spondin 1374..1433 CDD:480609 11/85 (13%)
Blue background indicates that the domain is not in the aligned region.

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