DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sona and Adamts18

DIOPT Version :10

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:XP_006530858.1 Gene:Adamts18 / 208936 MGIID:2442600 Length:1253 Species:Mus musculus


Alignment Length:714 Identity:177/714 - (24%)
Similarity:258/714 - (36%) Gaps:244/714 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GLPDLHKQMTPEQLQSVFHVDTHDAVPHYELVQLQHHENNHNRRRRSIGKGPKVNAALPPHHVKK 85
            ||.|.:..:.|.::.|.....:||.:              |:|:|||                  
Mouse    91 GLNDDYVFVVPVEVDSGGSYISHDIL--------------HHRKRRS------------------ 123

  Fly    86 DLSKNAYYSELKHEALASGGNHLFAPEVSAIKSHNVSFSAFGQHLNLSLRATQGLFKGAPHQLRM 150
                            |.|          |..|.:...|||||.|:|.|:.:..|   :.| .|:
Mouse   124 ----------------AHG----------ASNSLHYRVSAFGQDLHLELKPSAIL---SSH-FRV 158

  Fly   151 WTVGSE-PNATHGLDLQEIVHEQHTSNDVGEVFQDEKNMAAI--------LMRRHMETGDLIMEG 206
            ..:|.: .:.|...::.:.:::       |.:..|..:..|:        |:|    |.|     
Mouse   159 QVLGKDGASETREPEVPQCLYQ-------GFIRNDSSSSVAVSTCAGLSGLIR----TRD----- 207

  Fly   207 SIGHDLVIKPLPHELS-----PNPEESH-HIIYKREASAAEGQLSDF------------AFMEPD 253
               ::.:|.|||..|:     .:|...| |::|||.|........|:            :...| 
Mouse   208 ---NEFLISPLPQLLAQEHNYSSPAGHHPHVLYKRTAEKRVRWYQDYPGSQRTYPGHSPSHTPP- 268

  Fly   254 DLLASEKLE------RLQRRQ--RRSRRSAPSSPDFEDLNDEDEGALDGEPQVAESRTRSRRQAP 310
               ||:..|      |.|:|.  .|.::.||..|..:.....||....|.|:      ||..::.
Mouse   269 ---ASQSQEPEYSHRRWQKRHFCGRRKKYAPKPPAEDAYLRFDEYGGTGRPR------RSAGKSQ 324

  Fly   311 YIIYPEVLVIVDYDGYRLHGGDNLQVKRYFISFWNGVDLRYRLLK----GPRIRISIAGIIISRG 371
            ..:..|.||:.|......||.|:  |..|.::..|.|.   .|.|    |..|.|.:..:|:   
Mouse   325 NGLNVETLVVADAKMVEKHGKDD--VTTYILTVMNMVS---SLFKDGTIGSDINIVVVSLIL--- 381

  Fly   372 RDATPYLER-------NRVGRDAIDS-----AAALTDMGKYLFRERRLPVYDIAVAITKLDMCRR 424
                  ||.       |.....:::|     :|.:...||.         :|.|:.:|..|:|..
Mouse   382 ------LEEEPEGLLINHHADQSLNSFCQWQSALVGKNGKR---------HDHAILLTGFDICSW 431

  Fly   425 TSAYGECNRGTAGFAYVGGACVVNKRLEKVNSVAIIEDTG-GFSGIIVAAHEVGHLLGAVHDGSP 488
            .:.  .|:  |.|||.:.|.|      .|..|..|.|||| |.:..|  |||.||..|.||||. 
Mouse   432 KNE--PCD--TLGFAPISGMC------SKYRSCTINEDTGLGLAFTI--AHESGHNFGMVHDGE- 483

  Fly   489 PPSYLGGPGAQRCRWEDGYIMSDLRHTERG-FRWSACTVQSFHHFLNGDTATCLHNAPHEDSALG 552
                 |.|    ||..:|.|||.......| |.||:|:.|....||:...|.||.:.|.:   .|
Mouse   484 -----GNP----CRKAEGNIMSPTLTGNNGVFSWSSCSRQYLKKFLSTPQAGCLVDEPKQ---TG 536

  Fly   553 R-----SLPGTLLSLDAQCRRDRGTYA--C----FKDERVCAQLFCFDAQTGY-C-VAYRPAAEG 604
            :     .|||.:...|.||:...|..|  |    .||  :|..|:|.  :.|: | ..:.|||||
Mouse   537 QYKYPDKLPGQIYDADMQCKWQFGAKAKLCSLGVMKD--ICKSLWCH--RVGHRCETKFMPAAEG 597

  Fly   605 SACGNGYHCLDGRCT------PLP-----------------------------SNIIPDYGHNY 633
            :|||....|..|:|.      |.|                             ||..|.||..|
Mouse   598 TACGLSMWCRQGQCVKLGELGPRPIHGQWSAWSKWSECSRTCGGGVKFQERHCSNPKPQYGGKY 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 73/246 (30%)
ADAMTS_CR_2 556..619 CDD:465496 25/70 (36%)
Adamts18XP_006530858.1 Pep_M12B_propep 99..237 CDD:460254 41/218 (19%)
ZnMc_ADAMTS_like 327..528 CDD:239801 72/245 (29%)
ADAMTS_CR_2 545..612 CDD:465496 25/70 (36%)
TSP1 626..678 CDD:214559 6/36 (17%)
ADAMTS_CR_3 682..782 CDD:437068
ADAMTS_spacer1 784..895 CDD:461796
TSP1_ADAMTS 917..965 CDD:465950
TSP1_ADAMTS 969..1025 CDD:465950
TSP1_ADAMTS 1029..1082 CDD:465950
TSP1_ADAMTS 1090..1149 CDD:465950
TSP1_ADAMTS 1159..1205 CDD:465950
PLAC 1220..1250 CDD:462560
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.