DRSC/TRiP Functional Genomics Resources

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Protein Alignment sona and T21B6.3

DIOPT Version :10

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_509829.2 Gene:T21B6.3 / 181284 WormBaseID:WBGene00011880 Length:821 Species:Caenorhabditis elegans


Alignment Length:534 Identity:107/534 - (20%)
Similarity:155/534 - (29%) Gaps:217/534 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   566 CRRDRGTYACFKDERV------CAQLFCFDAQTGYCVAYRPAAEGSA-----CGNGYHCLDGRCT 619
            |..|.|..:..:.:.|      ||::.           ...|.|||:     ....|.| ..:|.
 Worm    15 CLADAGRISVSRGKNVTKIDDLCARMH-----------NNTALEGSSPLLMMQATAYEC-QKKCV 67

  Fly   620 ---PLPSNIIPDYGHN-------YRLVYNKIDNKKDAAEDVESSSEETESQEDETESVE------ 668
               |..|.::..|.||       |....|.:.:|.|..|      ::.|:::|....:|      
 Worm    68 DIFPECSAVVYYYLHNETKKHFCYLFSDNSVQDKIDLVE------QKPENKKDIVRMLELVVDCH 126

  Fly   669 --D-----QDEGTTSSEEQEDNKIEQ--SSAAGGAAAQSTTTARSTTTTTVRTTSTTTTTAKPKS 724
              |     :::|..||.::.|.|..|  ..|..|....:..:..|:....||:.:.....   |.
 Worm   127 QFDAHPPLEEDGLASSTDKVDRKKRQQGDEAVEGVGDWTDWSHCSSNGHEVRSQACEYGR---KI 188

  Fly   725 KSFGYLHRSLPERQWMQDNGVLVTTRISSSVSSSSSGSSSGEAAATSTRRPTTTTTTQTPNLFQI 789
            :..|...||.|:|                        ..:..|...:.|.|...:..|.      
 Worm   189 QRRGCPARSAPQR------------------------VPAPPAQQYAPRAPEYPSAQQQ------ 223

  Fly   790 YTHELRKQIEYYLHMLQTQQHATKFQPEQQQQQSQQQQSIVEIPLVQKSLTNYSVTSSSSSTSNG 854
                 ::|.|......|.::|..:.|..|||||.||||.....|..|        ..........
 Worm   224 -----QQQREQQQREQQHREHQARLQQHQQQQQQQQQQQQQRPPQPQ--------PQPQPQPPQR 275

  Fly   855 AKQQPPS----------NKDENQRQQQQQQQAQQQLQDGLPDEENEATAGIQSNEAIERQKRKFP 909
            ..|||.|          .:.|.|:|||||||.|||.|.. |.::.:.|...              
 Worm   276 PPQQPQSFSGTHELHLQRQREQQQQQQQQQQQQQQRQQN-PQQQPQQTTQF-------------- 325

  Fly   910 TTPTAATSAAQKSATPATPATSATSARPTPTTAKPITTSSFLDAYFKKLQALHDAGSASSSTTTT 974
                 ..|..|..:.|..|                                              
 Worm   326 -----GQSQIQLQSGPVPP---------------------------------------------- 339

  Fly   975 TTTSVSSSVSSATSSKQQHPQQQQQQQVQQIADGSHFLKRTPHRSSLKAYKTSSSSSNNSSSQTQ 1039
                            ||||||||.||..:       |:|:|                  ..|..
 Worm   340 ----------------QQHPQQQQPQQQPE-------LERSP------------------LDQHA 363

  Fly  1040 QQQQQQQQQYATNY 1053
            |..||:..||..|:
 Worm   364 QLYQQRMSQYRENF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800
ADAMTS_CR_2 556..619 CDD:465496 12/63 (19%)
T21B6.3NP_509829.2 PAN_AP 35..108 CDD:214680 19/90 (21%)
TSP1 458..502 CDD:214559
TSP1 505..552 CDD:214559
TSP1 554..604 CDD:214559
TSP1 606..651 CDD:214559
TSP1 654..704 CDD:214559
TSP1 707..759 CDD:214559
TSP1 765..809 CDD:214559
Blue background indicates that the domain is not in the aligned region.

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