DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sona and T21B6.3

DIOPT Version :9

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_509829.2 Gene:T21B6.3 / 181284 WormBaseID:WBGene00011880 Length:821 Species:Caenorhabditis elegans


Alignment Length:534 Identity:107/534 - (20%)
Similarity:155/534 - (29%) Gaps:217/534 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   566 CRRDRGTYACFKDERV------CAQLFCFDAQTGYCVAYRPAAEGSA-----CGNGYHCLDGRCT 619
            |..|.|..:..:.:.|      ||::.           ...|.|||:     ....|.| ..:|.
 Worm    15 CLADAGRISVSRGKNVTKIDDLCARMH-----------NNTALEGSSPLLMMQATAYEC-QKKCV 67

  Fly   620 ---PLPSNIIPDYGHN-------YRLVYNKIDNKKDAAEDVESSSEETESQEDETESVE------ 668
               |..|.::..|.||       |....|.:.:|.|..|      ::.|:::|....:|      
 Worm    68 DIFPECSAVVYYYLHNETKKHFCYLFSDNSVQDKIDLVE------QKPENKKDIVRMLELVVDCH 126

  Fly   669 --D-----QDEGTTSSEEQEDNKIEQ--SSAAGGAAAQSTTTARSTTTTTVRTTSTTTTTAKPKS 724
              |     :::|..||.::.|.|..|  ..|..|....:..:..|:....||:.:.....   |.
 Worm   127 QFDAHPPLEEDGLASSTDKVDRKKRQQGDEAVEGVGDWTDWSHCSSNGHEVRSQACEYGR---KI 188

  Fly   725 KSFGYLHRSLPERQWMQDNGVLVTTRISSSVSSSSSGSSSGEAAATSTRRPTTTTTTQTPNLFQI 789
            :..|...||.|:|                        ..:..|...:.|.|...:..|.      
 Worm   189 QRRGCPARSAPQR------------------------VPAPPAQQYAPRAPEYPSAQQQ------ 223

  Fly   790 YTHELRKQIEYYLHMLQTQQHATKFQPEQQQQQSQQQQSIVEIPLVQKSLTNYSVTSSSSSTSNG 854
                 ::|.|......|.::|..:.|..|||||.||||.....|..|        ..........
 Worm   224 -----QQQREQQQREQQHREHQARLQQHQQQQQQQQQQQQQRPPQPQ--------PQPQPQPPQR 275

  Fly   855 AKQQPPS----------NKDENQRQQQQQQQAQQQLQDGLPDEENEATAGIQSNEAIERQKRKFP 909
            ..|||.|          .:.|.|:|||||||.|||.|.. |.::.:.|...              
 Worm   276 PPQQPQSFSGTHELHLQRQREQQQQQQQQQQQQQQRQQN-PQQQPQQTTQF-------------- 325

  Fly   910 TTPTAATSAAQKSATPATPATSATSARPTPTTAKPITTSSFLDAYFKKLQALHDAGSASSSTTTT 974
                 ..|..|..:.|..|                                              
 Worm   326 -----GQSQIQLQSGPVPP---------------------------------------------- 339

  Fly   975 TTTSVSSSVSSATSSKQQHPQQQQQQQVQQIADGSHFLKRTPHRSSLKAYKTSSSSSNNSSSQTQ 1039
                            ||||||||.||..:       |:|:|                  ..|..
 Worm   340 ----------------QQHPQQQQPQQQPE-------LERSP------------------LDQHA 363

  Fly  1040 QQQQQQQQQYATNY 1053
            |..||:..||..|:
 Worm   364 QLYQQRMSQYRENF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800
T21B6.3NP_509829.2 PAN_AP 35..108 CDD:214680 19/90 (21%)
TSP1 458..502 CDD:214559
TSP1 505..552 CDD:214559
TSP1 554..604 CDD:214559
TSP1 606..651 CDD:214559
TSP1 654..704 CDD:214559
TSP1 707..759 CDD:214559
TSP1 765..809 CDD:214559
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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