DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sona and gon-1

DIOPT Version :9

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_001255448.1 Gene:gon-1 / 177850 WormBaseID:WBGene00001650 Length:2165 Species:Caenorhabditis elegans


Alignment Length:702 Identity:152/702 - (21%)
Similarity:248/702 - (35%) Gaps:203/702 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 GGNHLFAPEVS-----------AIKSHNVSFSAFGQHLNLSLRATQGLFKGAPHQLRMWTVGSEP 157
            |..||..|.|:           |::|.:.:.|.|...:..|    :..:.|.|.....|   .:.
 Worm     6 GSFHLLQPVVAALILLVVCLVYALQSGSGTISEFSSDVLFS----RAKYSGVPVHHSRW---RQD 63

  Fly   158 NATHGLDLQEIVHEQH---------TSND----VGEVFQDEKNMAAILMRR-------HMETGDL 202
            ...|.:|...||....         ||.|    :..|.:|..:...:.:|.       |:...:.
 Worm    64 AGIHVIDSHHIVRRDSYGRRGKRDVTSTDRRRRLQGVARDCGHACHLRLRSDDAVYIVHLHRWNQ 128

  Fly   203 IMEGSIGHDLVIKPLPHELSPNPEESHHIIYKREASAAEGQLSDFAFMEPD-------------- 253
            |.:   .|:   |.:||  ..|...:..::|........|.:|.   .:||              
 Worm   129 IPD---SHN---KSVPH--FSNSNFAPMVLYLDSEEEVRGGMSR---TDPDCIYRAHVKGVHQHS 182

  Fly   254 --DLLASE--------------KLERL------------QRRQRRSRRSAPSS-PDFEDLN---- 285
              :|..||              .:|.:            :.||...|:..|.. ..|:.||    
 Worm   183 IVNLCDSEDGLYGMLALPSGIHTVEPIISGNGTEHDGASRHRQHLVRKFDPMHFKSFDHLNSTSV 247

  Fly   286 DEDEGAL----DGEPQVAESRTRSRRQA-PYIIYPEVLVIVDYDGYRLHGGDNLQVKRYFISFWN 345
            :|.|..:    |....|.|.:.||||.| .:..|.||||:.|...|..||   ..::.|.::.::
 Worm   248 NETETTVATWQDQWEDVIERKARSRRAANSWDHYVEVLVVADTKMYEYHG---RSLEDYVLTLFS 309

  Fly   346 GVD--LRYRLLKGPRIRISIAGIIISRGRDATPYLERN------------RVGRDAIDSAAALTD 396
            .|.  .|::.|:. .|.:.:..:|:.:..:|.|.:.:|            :...|..||:     
 Worm   310 TVASIYRHQSLRA-SINVVVVKLIVLKTENAGPRITQNAQQTLQDFCRWQQYYNDPDDSS----- 368

  Fly   397 MGKYLFRERRLPVYDIAVAITKLDMCRRTSAYGECNRGTAGFAYVGGACVVNKRLEKVNSVAIIE 461
                      :..:|:|:.:|:.|:||   :.|:|:  |.|.|.:|..|.:.|      |.||||
 Worm   369 ----------VQHHDVAILLTRKDICR---SQGKCD--TLGLAELGTMCDMQK------SCAIIE 412

  Fly   462 DTGGFSGIIVAAHEVGHLLGAVHDGSPPPSYLGGPGAQRC------RWEDGYIMS-DLRHTERGF 519
            | .|.|.....|||:||:....||..           ::|      ...:.:||: .|.:....:
 Worm   413 D-NGLSAAFTIAHELGHVFSIPHDDE-----------RKCSTYMPVNKNNFHIMAPTLEYNTHPW 465

  Fly   520 RWSACTVQSFHHFL--NGDTATCLHNAPHE----DSALGRSLPGTLLSLDAQCRRDRG--TYACF 576
            .||.|:......||  |.....||.:.|.|    :....|..||.......||:...|  :..| 
 Worm   466 SWSPCSAGMLERFLENNRGQTQCLFDQPVERRYYEDVFVRDEPGKKYDAHQQCKFVFGPASELC- 529

  Fly   577 KDERVCAQLFC---FDAQTGYCVAYRPAAEGSAC--GNGYHCLDGRCTPL-PSNIIPDYGHNYRL 635
            .....|.:|:|   :.:|.|....:.|.|:|:.|  .....|..|.|..| |.::          
 Worm   530 PYMPTCRRLWCATFYGSQMGCRTQHMPWADGTPCDESRSMFCHHGACVRLAPESL---------- 584

  Fly   636 VYNKIDNK-----------KDAAEDVESSSEETESQEDETESVEDQDEGTTS 676
              .|||.:           :.....|:....:.:|.:.|.| ||......||
 Worm   585 --TKIDGQWGDWRSWGECSRTCGGGVQKGLRDCDSPKSENE-VETLKSNVTS 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 61/251 (24%)
gon-1NP_001255448.1 Pep_M12B_propep 93..228 CDD:279848 21/145 (14%)
Reprolysin 280..493 CDD:279729 62/254 (24%)
ZnMc_ADAMTS_like 280..490 CDD:239801 61/251 (24%)
TSP1 591..658 CDD:214559 8/44 (18%)
ADAM_spacer1 769..885 CDD:283607
TSP1 1022..1077 CDD:214559
TSP1 1079..1129 CDD:214559
TSP1 1131..1185 CDD:214559
TSP1 1190..1242 CDD:214559
TSP1 1247..1296 CDD:214559
TSP1 1296..1354 CDD:214559
TSP1 1371..1424 CDD:214559
TSP1 1493..1539 CDD:214559
TSP1 1546..1599 CDD:214559
TSP1 1640..1695 CDD:214559
TSP1 1697..1751 CDD:214559
TSP1 1813..1881 CDD:214559
TSP1 1886..1938 CDD:214559
GON 1942..2137 CDD:285848
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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