DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sona and Papln

DIOPT Version :9

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_001192272.1 Gene:Papln / 170721 MGIID:2386139 Length:1302 Species:Mus musculus


Alignment Length:498 Identity:105/498 - (21%)
Similarity:148/498 - (29%) Gaps:188/498 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 EASAA-------EGQLSDFAFMEPDDLLASEKLERLQRRQ----RRSRRSAPSSPDFEDLNDEDE 289
            ||.||       .||.......|||...|...:.||....    ||.:..||..|..........
Mouse   832 EAGAAGHRAHVDGGQRGPGGQQEPDWHRAGATIPRLPSPSGSPWRREQEPAPGEPPHIPAYGNRP 896

  Fly   290 GALDGEPQVAESRTRSRRQAPYIIYPEVLVIVDYDGYRLHGGDNL-------QVKRYFI------ 341
            |..:..|:|......:|...|....|...:       ||.|.:..       |..:.|.      
Mouse   897 GGQEIRPRVPGLDREARPAVPPTHSPSYRI-------RLAGSEPSLVQAAPGQAVQLFCPGNIPS 954

  Fly   342 SFWNGVDLRYRLLKGPRIRISIAG-IIISRGR--DATPY-LERNRVGRDAIDSAAALT--DMGKY 400
            .|..|.....|.:...|.::...| :||||.|  ||..| ...:|.|.:..:....:|  ||..:
Mouse   955 EFQAGWQKEGRPISSNRYQLQADGSLIISRLRPEDAGIYSCGSHRPGHEPQEIQLRVTGGDMAVF 1019

  Fly   401 ------LFRERRLPVYDIAVAITKLDMCRRTSAYGECNRGTAGFAYVGGACVVNK---------R 450
                  .|.|.|.|           |:     .:|..:|||.  |..||..|::.         |
Mouse  1020 PEGQPRHFPEPRNP-----------DL-----GHGPPHRGTG--AEAGGHRVLSPSHPRPATRLR 1066

  Fly   451 LEKVNSVAIIEDTGGFSGIIVAAHEVGHLLGAVHDGSPPPSYLGGPGAQRCRWE-DGYIMSDLRH 514
            |::..           .|::.|:......|....:|.|.|:         ..|: ||.::|..||
Mouse  1067 LDRTQ-----------PGVVDASPGQRIRLTCRAEGFPVPT---------IEWQRDGQLVSSPRH 1111

  Fly   515 ----------------------------TERGFRW---------------SACTVQSFHHFLNGD 536
                                        .:|..||               .|.||      ..||
Mouse  1112 QVQPDGSLVISRVDVEDGGYYSCVAFNGQDRDQRWVQLRVLRELTITGLPPAVTV------AEGD 1170

  Fly   537 TATCL--------------------------HNAPHEDSALGRSLPGTLLSLDAQCRRDRGTYAC 575
            ||..|                          |.:|          .||||..:.: .||.|:|.|
Mouse  1171 TARLLCVVAGESVNIRWSRNGLPIQADGHRVHQSP----------DGTLLIHNLR-PRDEGSYTC 1224

  Fly   576 --FKDERVCAQLFCFDAQTGYCVAY-RPAAEGSACGNGYHCLD 615
              |:..:..::      .|...||. .|||:....|.  .|:|
Mouse  1225 SAFRGSQAVSR------STEVKVALPAPAAQSRDLGK--DCID 1259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 62/332 (19%)
PaplnNP_001192272.1 TSP1 30..81 CDD:214559
ADAM_spacer1 184..299 CDD:368694
TSP1 309..362 CDD:214559
TSP1 389..447 CDD:214559
TSP1 447..504 CDD:214559
TSP1 511..562 CDD:214559
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..648
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 694..737
Kunitz_BPTI 771..822 CDD:333766
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 822..924 23/91 (25%)
Papilin_u7 831..922 CDD:374683 22/89 (25%)
Ig 932..>995 CDD:386229 15/62 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1024..1064 13/57 (23%)
I-set 1070..1141 CDD:369462 12/90 (13%)
Ig 1157..1241 CDD:386229 21/106 (20%)
PLAC 1257..1289 CDD:370061 2/3 (67%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.