DRSC/TRiP Functional Genomics Resources

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Protein Alignment sona and Adamts6

DIOPT Version :9

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:NP_001074489.1 Gene:Adamts6 / 108154 MGIID:1347348 Length:1117 Species:Mus musculus


Alignment Length:629 Identity:156/629 - (24%)
Similarity:231/629 - (36%) Gaps:153/629 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 HYEL-VQLQHHEN-----------NHNRRRRSIGKGPKVNAALPPHHVKKDLSKNAYYSELKHEA 100
            ||:| :.::..:|           .|:|||||:                                
Mouse    41 HYQLTIPIRVDQNGAFLSFTVKNDKHSRRRRSM-------------------------------- 73

  Fly   101 LASGGNHLFAPEVSAIKSHNVSFSAFGQ--HLNLSLRATQGLFKGAPHQLRMWTVGSEPNATHGL 163
                  .|..|: .|:.......||:|:  ||||:|...   |......:..|          |.
Mouse    74 ------DLLDPQ-QAVSKLFFKLSAYGKHFHLNLTLNTN---FVSKHFTVEYW----------GK 118

  Fly   164 DLQEIVHEQHTSNDVGEVFQDEKNMAAILMRRHMETGDLIMEGSIG-HDLV--------IKPLPH 219
            |..:..|:          |.|..:....|..:| .|..:.:...:| |.::        |:||.:
Mouse   119 DGPQWKHD----------FLDNCHYTGYLQDQH-STTKVALSNCVGLHGIIATEDEEYFIEPLKN 172

  Fly   220 ELSPNP----EESH-HIIYKREASAAEGQLSDFAFMEPDDLLASEKLERLQRRQRRSRRSAPSSP 279
            ....:.    |..| |:|||: ::..:..:.|.:.....||..|.|...|.:..     |.||.|
Mouse   173 TTEDSKHFSYENGHPHVIYKK-STLQQQHIYDHSHCGVSDLTGSGKPWWLNKTS-----SFPSLP 231

  Fly   280 DFEDLNDEDEGALDGEPQVAESRTRSRRQAPYIIYPEVLVIVDYDGYRLHGGDNLQVKRYFISFW 344
            ...|               .....|.||......:.|.||:.|......||  ...::.|.:|..
Mouse   232 PIND---------------THIHHRKRRSVSTERFVETLVVADKMMVGYHG--RKDIEHYILSVM 279

  Fly   345 NGVDLRYR-LLKGPRIRISIAGIIISRGRDATPYLERNRVGRDAIDS-----AAALTDMGK-YLF 402
            |.|...|| ...|..:.|.:|.:|:.  .:..|.||.|.....::||     .:.|:.... ...
Mouse   280 NIVAKLYRDSSLGNVVNIIVARLIVL--TEDQPNLEINHHADKSLDSFCKWQKSILSHQSDGNTI 342

  Fly   403 RERRLPVYDIAVAITKLDMCRRTSAYGECNRGTAGFAYVGGACVVNKRLEKVNSVAIIEDTGGFS 467
            .|..:..:|.||.||:.|:|    .|.....||.|.|.|.|.|      |...|.:|.||.|..|
Mouse   343 PENGIAHHDNAVLITRYDIC----TYKNKPCGTLGLASVAGMC------EPERSCSINEDIGLGS 397

  Fly   468 GIIVAAHEVGHLLGAVHDGSPPPSYLGGPGAQRCRWEDGYIMSDLRHTERGFRWSACTVQSFHHF 532
            ...: |||:||..|..|||.  .:..|..|.:..:....:|.::    ...|.||||:......|
Mouse   398 AFTI-AHEIGHNFGMNHDGI--GNSCGTKGHEAAKLMAAHITAN----TNPFSWSACSRDYITSF 455

  Fly   533 LNGDTATCLHNAPHEDSALGRSL-PGTLLSLDAQCRRDRGTYA--CFKDERVCAQLFCFDAQTGY 594
            |:....|||.|.|.:...|..:: ||.:...|.|||...|..:  | |...||.:|:|. :::..
Mouse   456 LDSGRGTCLDNEPPKRDFLYPAVAPGQVYDADEQCRFQYGATSRQC-KYGEVCRELWCL-SKSNR 518

  Fly   595 CVAYR-PAAEGSACGNGY----HCLDGRCTPL---PSNIIPDYG 630
            ||... |||||:.|..|.    .|..|.|.|.   |.:|...:|
Mouse   519 CVTNSIPAAEGTLCQTGNIEKGWCYQGDCVPFGTWPQSIDGGWG 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 67/235 (29%)
Adamts6NP_001074489.1 Pep_M12B_propep 43..191 CDD:366707 37/210 (18%)
ZnMc_ADAMTS_like 250..465 CDD:239801 67/235 (29%)
ADAM_CR_2 480..548 CDD:375321 24/69 (35%)
TSP1 561..613 CDD:214559 1/2 (50%)
ADAM_spacer1 719..829 CDD:368694
TSP1 843..900 CDD:214559
TSP1 902..960 CDD:214559
TSP1 1022..1069 CDD:214559
PLAC 1083..1115 CDD:370061
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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