DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sona and adamts17

DIOPT Version :9

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:XP_021333385.1 Gene:adamts17 / 101884120 ZFINID:ZDB-GENE-121030-7 Length:1134 Species:Danio rerio


Alignment Length:461 Identity:115/461 - (24%)
Similarity:169/461 - (36%) Gaps:103/461 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 AEGQLSDFAFMEPDDLLASEKLERLQRRQRRSRRSAPSSPDFEDLNDEDEGALDGEPQVAES--- 301
            ||.:|    |:||.. .|::.....:.|..|.:.|:|..|         ..|.||..|..:|   
Zfish   147 AEERL----FIEPVG-QAADSFSGWEHRVIREKHSSPDGP---------APAADGREQFCQSIHD 197

  Fly   302 -----------RTRSRRQA-----PYIIYPEVLVIVDYDGYRLHGGDNLQVKRYFISFWNGVDLR 350
                       :.|.||.|     .|.:  |.||:.|.:..:.||.:..|  |:.::..|.|   
Zfish   198 KKKEKRPRGAEQVRGRRNAIRLSREYTV--ETLVVADANMVQYHGAEAAQ--RFLLTVMNMV--- 255

  Fly   351 YRLLK----GPRIRISIAGIIISRGRDATPYLERNRVGRDAIDSAAALTDMGKYLFRERRL---- 407
            |.:.:    |.|:.|.:..:::...|.     |:.:||.....:..:........:..|.|    
Zfish   256 YNMFQHQSLGLRLNIRVTKLVLLHNRP-----EKLKVGHHGEKALESFCHWQHEEYGARYLGNNH 315

  Fly   408 --------PVYDIAVAITKLDMCRRTSAYGECNRGTAGFAYVGGACVVNKRLEKVNSVAIIEDTG 464
                    |..|.||.:|:.|.|.....  .|:  |.|.||:||.|...::       .::.:..
Zfish   316 VPGSRDDPPPVDAAVLVTRTDFCVHKDE--PCD--TVGIAYLGGTCSSKRK-------CVLAEDN 369

  Fly   465 GFSGIIVAAHEVGHLLGAVHDGSPPPSYLGGPGAQRCRWEDGYIMSDLRHTERGFRWSACTVQSF 529
            |.:.....|||:||.:|..|| ....|..|........|..|...|||       .||.|:....
Zfish   370 GLNLAFTIAHELGHNMGMSHD-DDHASCTGHSHIMSGEWVKGRNPSDL-------SWSTCSRDDL 426

  Fly   530 HHFLNGDTATC-LHNAPHED--SALGRSLPGTLLSLDAQCRRDRGTYACF---KDERVCAQLFCF 588
            ..||....:.| ||..|...  ..|...|||...|.|.||:...||.|.|   .:..:||.|:|.
Zfish   427 EKFLRSKASGCLLHTDPRNRYLVRLPAKLPGMHYSADEQCQILFGTNATFCTDMEHLMCAGLWCL 491

  Fly   589 -DAQTGYCVAYRPAAEGSACGNGYHCLDGRC---TPLPSNIIPDY-------------GHNYRLV 636
             :..|.......|..:|:.||....|..|.|   ||:|.::..|:             |...|..
Zfish   492 VEGDTSCKTKLDPPLDGTECGADKWCRAGECVSKTPIPQHVDGDWSPWSTWSMCSRTCGTGARFR 556

  Fly   637 YNKIDN 642
            ..|.||
Zfish   557 QRKCDN 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 57/245 (23%)
adamts17XP_021333385.1 Pep_M12B_propep 33..170 CDD:307618 7/27 (26%)
ZnMc_ADAMTS_like 223..439 CDD:239801 58/246 (24%)
TSP1 536..587 CDD:214559 5/27 (19%)
ADAM_spacer1 729..824 CDD:310520
TSP1 907..>931 CDD:214559
TSP1 966..1013 CDD:214559
TSP1 1018..1070 CDD:214559
PLAC 1099..1123 CDD:312271
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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