DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sona and adamts3

DIOPT Version :10

Sequence 1:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster
Sequence 2:XP_012810820.2 Gene:adamts3 / 100498276 XenbaseID:XB-GENE-490472 Length:1199 Species:Xenopus tropicalis


Alignment Length:579 Identity:140/579 - (24%)
Similarity:214/579 - (36%) Gaps:144/579 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 NH--LFAPEVSAIKSHNVSF--SAFGQHLNLSLRATQGLFKGAPHQLRMWTVGSEPNATHGLDLQ 166
            ||  .|..:.|.:: |.:.|  :|||:..:|.||....|.  ||..:..|. ..:.|.|:|..  
 Frog    65 NHKKRFTRDTSQVQ-HTLYFNVTAFGREFHLKLRPNTKLI--APGAVIEWH-EDQVNLTNGFH-- 123

  Fly   167 EIVHEQHTSND-----------------VGEVFQDEKNMAAIL-------MRRHMETGDLIMEGS 207
              ...|:..||                 |||:......:.|:.       |.|..|         
 Frog   124 --TGNQNPDNDTAHQIWRKESLWTNCAYVGEITDSPGALVALSNCDGLAGMIRTKE--------- 177

  Fly   208 IGHDLVIKPLPHELSPNPEESH-HIIYKREAS--AAEGQLSDFAFMEPDDLLASEKLERLQRRQR 269
              .:..|:||......:.|... |::|||..:  ...|...:|                      
 Frog   178 --DEYFIEPLERGKQKDEENGRLHVVYKRSTAKQIPTGDSHNF---------------------- 218

  Fly   270 RSRRSAPSSPDFEDLNDEDEGALDGEPQVAESRTRSRRQAPYIIYPEVLVIVDYDGYRLHGGDNL 334
                   |..||..|::.|....:.|.||.|:..|.|.........|||:.||....|.||.:::
 Frog   219 -------SEADFAGLDNVDSIFSNIEKQVNETLRRRRHAGENDYNIEVLLGVDDSVVRFHGKEHV 276

  Fly   335 QVKRYFISFWNGVDLRYRLLK-GPRIRISIAGIIISRGRDATPYLERNRVGRDAIDSAAALTDMG 398
            |  .|.::..|.|:..|.... |..|.|.:..:|:.....:...:||....|       :|.::.
 Frog   277 Q--NYLLTLMNIVNEIYHDDSIGVHINIVLVRMIMLGYAKSISLIERGSPSR-------SLDNVC 332

  Fly   399 KYLFRERRLPV-----YDIAVAITKLDMCRRTSAYGECNRGTAGFAYVGG------ACVVNKRLE 452
            ::..::::...     :|.|:.:|:.|       :|..  |..|:|.|.|      :|.:|.   
 Frog   333 RWASQQQKADPNHSEHHDHAIFLTRQD-------FGPA--GMQGYAPVTGMCHPMRSCTLNH--- 385

  Fly   453 KVNSVAIIEDTGGFSGIIVAAHEVGHLLGAVHDGSPPPSYLGGPGAQRCRWED--GYIMSDL-RH 514
                    ||  |||...|.|||.||:||..|||.          ..||..|.  |.:|:.| :.
 Frog   386 --------ED--GFSSAFVVAHETGHVLGMEHDGQ----------GNRCGDETAMGSVMAPLVQA 430

  Fly   515 TERGFRWSACTVQSFHHFLNGDTATCLHNAPHE-DSALGRSLPGTLLSLDAQCRRDRGT----YA 574
            ....:.||.|:.|....:::  :..||.:.|.| |......|||...|:|.|||.|.|.    ..
 Frog   431 AFHRYHWSRCSGQELKRYIH--SYDCLLDDPFEHDWPKLPDLPGINYSMDEQCRFDFGVGYKMCT 493

  Fly   575 CFKDERVCAQLFCFDAQTGY-CVAYR-PAAEGSACGNGYHCLDGRCTPLPSNIIPDYGH 631
            .|:....|.||:|......| |...: |..:|:.|..|..|..|.|....:|.:...|:
 Frog   494 AFRTFEPCKQLWCNHPDNPYFCKTKKGPPLDGTECAPGKWCYKGHCMWKTTNQVKQDGN 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 60/243 (25%)
ADAMTS_CR_2 556..619 CDD:465496 22/68 (32%)
adamts3XP_012810820.2 Pep_M12B_propep 44..202 CDD:460254 34/155 (22%)
ZnMc_ADAMTS_like 255..456 CDD:239801 60/243 (25%)
ADAMTS_CR_2 471..539 CDD:465496 22/67 (33%)
TSP1 553..605 CDD:214559 140/579 (24%)
ADAMTS_CR_3 610..711 CDD:437068
ADAMTS_spacer1 713..826 CDD:461796
TSP1_ADAMTS 848..903 CDD:465950
TSP1_ADAMTS 908..965 CDD:465950
TSP1_ADAMTS 969..1014 CDD:465950
PLAC 1022..1050 CDD:462560
Blue background indicates that the domain is not in the aligned region.

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